RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PRR23D1E9PI22 279 aaPredicted RBP5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 KRT36O76013 467 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 NRASP01111 189 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 SEMG1P04279 462 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 MRPL3P09001 348 aaKnown RBP5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 PRR23D2P0DMB1 279 aaPredicted RBP5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 IGHV1-8P0DP01 117 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 AZGP1P25311 298 aaKnown RBP5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 LMO1P25800 156 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 ARHGDIBP52566 201 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 SNU13P55769 128 aaKnown RBP5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 RIPPLY1Q0D2K3 151 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 IL18R1Q13478 541 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 KLHL22Q53GT1 634 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 FAM76BQ5HYJ3 339 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 LINC01590Q5TEZ4 76 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 LCN8Q6JVE9 175 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 PLBD1Q6P4A8 553 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 KCTD18Q6PI47 426 aaPredicted RBP5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 CYP2R1Q6VVX0 501 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 ZNF573Q86YE8 665 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 C11orf42Q8N5U0 333 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 TPRX1Q8N7U7 411 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 OTOSQ8NHW6 89 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 TRMT10AQ8TBZ6 339 aaKnown RBP5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 OR51E1Q8TCB6 317 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 WIPF2Q8TF74 440 aaPredicted RBP5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 TFAP2CQ92754 450 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 ZNF714Q96N38 554 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 OR8B4Q96RC9 309 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 SLC25A33Q9BSK2 321 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 REEP1Q9H902 201 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 GPR84Q9NQS5 396 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 CMC2Q9NRP2 79 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 ENPP5Q9UJA9 477 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 IKZF2Q9UKS7 526 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 SLC22A13Q9Y226 551 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 KLHDC2Q9Y2U9 406 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 U3KQK5 164 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 IGHV2-26A0A0B4J1V2 119 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 TMEM269A0A1B0GVZ9 245 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 FAM230AA0A1W2PPH8 454 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 PSMB11A5LHX3 300 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 H3BSH0 61 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 J3QT63 122 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 PGA5P0DJD9 388 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 GABRR1P24046 479 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 HTR1DP28221 377 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 BRS3P32247 399 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 HCCSP53701 268 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 DGCR2P98153 550 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 RBM39Q14498 530 aaKnown RBP5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 TCTEX1D4Q5JR98 221 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 LDLRAD2Q5SZI1 272 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 ZNF770Q6IQ21 691 aaPredicted RBP5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 C8orf86Q6ZUL3 223 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 ANGPTL5Q86XS5 388 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 CALHM1Q8IU99 346 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 MRPL41Q8IXM3 137 aaKnown RBP5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 LINC00482Q8N8I6 264 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 KLHL30-AS1Q8NEE0 82 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 OR11H6Q8NGC7 330 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 ASCL2Q99929 193 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 CLEC7AQ9BXN2 247 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 MROQ9BYG7 248 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 CHST6Q9GZX3 395 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 PBOV1Q9GZY1 135 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 FAM107BQ9H098 131 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 PLEKHA1Q9HB21 404 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 PAPOLBQ9NRJ5 636 aaKnown RBP5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 SAMHD1Q9Y3Z3 626 aaKnown RBP5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 SESN1Q9Y6P5 492 aa5.34□□□□□ -1.55
RTFDC1-206ENST00000477485 KMT2CQ8NEZ4 4911 aaKnown RBP5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 A0A0U1RQV5 110 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 hADV38S2A0JD32 116 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 K7N7A8 449 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 DHRS3O75911 302 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 RBP4P02753 201 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 HSD17B1P14061 328 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 DYNLT3P51808 116 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 DLX6P56179 175 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 MFGE8Q08431 387 aaPredicted RBP5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 EGFEM1PQ0D2K5 195 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 GRK1Q15835 563 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 SNAPC1Q16533 368 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 MICAQ29983 383 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 ODF4Q2M2E3 257 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 ZNF829Q3KNS6 432 aaPredicted RBP5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 CLVS2Q5SYC1 327 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 BCL2L15Q5TBC7 163 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 MINOS1Q5TGZ0 78 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 ZBTB49Q6ZSB9 765 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 C16orf82Q7Z2V1 217 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 TRPM8Q7Z2W7 1104 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 ZNF329Q86UD4 541 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 CPOQ8IVL8 374 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 OR8H2Q8N162 312 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 BBS1Q8NFJ9 593 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 OR10G2Q8NGC3 310 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 EMG1Q92979 244 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms