RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 IGHV1OR15-9A0A0B4J2B8 117 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 CDK2AP1O14519 115 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 RER1O15258 196 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 IL9P15248 144 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 GNG4P50150 75 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 PPP1CAP62136 330 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 MIDNQ504T8 468 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 TUSC5Q8IXB3 177 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 OR5D13Q8NGL4 314 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 N4BP2Q86UW6 1770 aaPredicted RBP16.57■□□□□ 0.24
VARS2-209ENST00000477288 ORM2P19652 201 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 SLC38A11Q08AI6 406 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 TGIF2LYQ8IUE0 185 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 ABHD14AQ9BUJ0 271 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 SEBOXQ9HB31 216 aaPredicted RBP16.57■□□□□ 0.24
VARS2-209ENST00000477288 TNFSF14O43557 240 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 EPHA8P29322 1005 aaPredicted RBP16.56■□□□□ 0.24
VARS2-209ENST00000477288 RANP62826 216 aaKnown RBP16.56■□□□□ 0.24
VARS2-209ENST00000477288 HIST1H3AP68431 136 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 MOGAT2Q3SYC2 334 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 TMEM92Q6UXU6 159 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 SPSB1Q96BD6 273 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 OR2D2Q9H210 308 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 TREM2Q9NZC2 230 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 F5P12259 2224 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 OR4A8P0C604 315 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 SPINK14Q6IE38 97 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 CT55Q8WUE5 264 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 ARHGAP5-AS1Q96IT6 56 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 DOK1Q99704 481 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 GPR87Q9BY21 358 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 PRDM7Q9NQW5 492 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 M0R296 226 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 ZNF32P17041 273 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 FAAP24Q9BTP7 215 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 EVPLQ92817 2033 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 K7ESF4 209 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 CD40P25942 277 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 IGFBP7Q16270 282 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 ZMIZ1Q9ULJ6 1067 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 MED19A0JLT2 244 aaPredicted RBP16.56■□□□□ 0.24
VARS2-209ENST00000477288 DNPH1O43598 174 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 RTP5Q14D33 572 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 ZNF66Q6ZN08 573 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 OR4D9Q8NGE8 314 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 RAB1CQ92928 201 aa16.56■□□□□ 0.24
VARS2-209ENST00000477288 TNXAQ16473 311 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 C16orf47Q6ZP98 133 aaPredicted RBP16.55■□□□□ 0.24
VARS2-209ENST00000477288 OR1B1Q8NGR6 318 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 GPR137Q96N19 417 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 COA4Q9NYJ1 87 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 RNASEK-C17orf49H0YIS7 233 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 MCHR2Q969V1 340 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 OR2A5Q96R48 311 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 GALNSP34059 522 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 RNF2Q99496 336 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 FGF20Q9NP95 211 aaPredicted RBP16.55■□□□□ 0.24
VARS2-209ENST00000477288 LAMB1P07942 1786 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 A0A1B0GTQ1 180 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 SP1P08047 785 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 SPINK2P20155 84 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 PSMB2P49721 201 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 LSM11P83369 360 aaKnown RBP eCLIP16.55■□□□□ 0.242e-6■■■■□ 22.2
VARS2-209ENST00000477288 Q7L0L9 218 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 OCEL1Q9H607 264 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 MMP25Q9NPA2 562 aa16.55■□□□□ 0.24
VARS2-209ENST00000477288 IGKV3-7A0A075B6H7 116 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 TRAV34A0A0B4J273 112 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 ZNF207O43670 478 aaKnown RBP16.54■□□□□ 0.24
VARS2-209ENST00000477288 COL9A1P20849 921 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 NPY1RP25929 384 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 TOMM34Q15785 309 aaPredicted RBP16.54■□□□□ 0.24
VARS2-209ENST00000477288 C11orf87Q6NUJ2 197 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 AP5S1Q9NUS5 200 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 SLC17A2O00624 439 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 CELA2BP08218 269 aaPredicted RBP16.54■□□□□ 0.24
VARS2-209ENST00000477288 FPR2P25090 351 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 KISS1Q15726 138 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 PRSS41Q7RTY9 318 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 OR5V1Q9UGF6 321 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 PTHLHP12272 177 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 CEACAM3P40198 252 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 KCNJ3P48549 501 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 BHLHA15Q7RTS1 189 aaPredicted RBP16.54■□□□□ 0.24
VARS2-209ENST00000477288 CCDC190Q86UF4 302 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 MRGPRDQ8TDS7 321 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 RHNO1Q9BSD3 238 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 TRAV1-2A0A0B4J238 106 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 A0A1W2PN81 502 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 hADV38S2A0JD32 116 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 CHRNA7P36544 502 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 RAB7AP51149 207 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.54■□□□□ 0.24
VARS2-209ENST00000477288 CIDEAO60543 219 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 TIAL1Q01085 375 aaKnown RBP eCLIP16.54■□□□□ 0.24
VARS2-209ENST00000477288 AANATQ16613 207 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 C12orf57Q99622 126 aa16.54■□□□□ 0.24
VARS2-209ENST00000477288 TMEM272A0A1B0GTI8 110 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 CTSVO60911 334 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms