RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 POLR2HP52434 150 aaKnown RBP13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 NUTF2P61970 127 aaKnown RBP13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 JOSD1Q15040 202 aaPredicted RBP13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 ZNF506Q5JVG8 444 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 TMEM182Q6ZP80 229 aaPredicted RBP13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 WDR5BQ86VZ2 330 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 LRTM2Q8N967 370 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 AVL9Q8NBF6 648 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 OR10G4Q8NGN3 311 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 TMEM242Q9NWH2 141 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 ATXN7L1Q9ULK2 861 aaPredicted RBP13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 A0A1W2PQD3 144 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 CLPSP04118 112 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 DHPSP49366 369 aaPredicted RBP13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 ERVFRD-1P60508 538 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 NHLH2Q02577 135 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 LYSMD4Q5XG99 296 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 ZNF429Q86V71 674 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 OOSP2Q86WS3 158 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 OR5AS1Q8N127 324 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 ZNF248Q8NDW4 579 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 PLPP5Q8NEB5 264 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 MISP3Q96FF7 219 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 SUCNR1Q9BXA5 334 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 MRPL37Q9BZE1 423 aaKnown RBP13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 HIPK2Q9H2X6 1198 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 PRO1933Q9H354 126 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 USP34Q70CQ2 3546 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 A8MWP6 167 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 C9J4A7 227 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 SDCBPO00560 298 aaPredicted RBP13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 MPZL1O95297 269 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 AHSA1O95433 338 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 TRGC2P03986 189 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 TRGC1P0CF51 173 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 IL2RGP31785 369 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 RND2P52198 227 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 RNF4P78317 190 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 PNRC1Q12796 327 aaPredicted RBP13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 PLXDC2Q6UX71 529 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 DPPA2Q7Z7J5 298 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 LINC00346Q8IVM7 164 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 C1orf210Q8IVY1 113 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 SFTPA2Q8IWL1 248 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 ASB10Q8WXI3 467 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 SLAMF6Q96DU3 332 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 RBMXL1Q96E39 390 aaKnown RBP13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 TGM7Q96PF1 710 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 ST6GALNAC5Q9BVH7 336 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 ACTR3CQ9C0K3 210 aaPredicted RBP13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 SH3BGRL3Q9H299 93 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 CENPMQ9NSP4 180 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 HS3ST3B1Q9Y662 390 aa13.39□□□□□ -0.27
CLSTN1-205ENST00000477264 FAM230AA0A1W2PPH8 454 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 FRG2CA6NGY1 282 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 FOXI3A8MTJ6 420 aaPredicted RBP13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 CDRT15L2A8MXV6 281 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 CRTAPO75718 401 aaPredicted RBP13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 C1QL1O75973 258 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 NSA2O95478 260 aaKnown RBP13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 HBE1P02100 147 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 DUSP1P28562 367 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 OR3A4PP47883 348 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 HSD17B7P56937 341 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 H3F3AP84243 136 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 LCN10Q6JVE6 187 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 ZNF524Q96C55 264 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 PISDQ9UG56 409 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 CLDN16Q9Y5I7 305 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 PHF3Q92576 2039 aaKnown RBP13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 TGIF2-C20orf24A0A0A6YYL0 155 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 ZNF727A8MUV8 499 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 HCRTR2O43614 444 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 SFTPCP11686 197 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 ALDH3B1P43353 468 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 ACY1Q03154 408 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 ZP4Q12836 540 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 ZNF385CQ66K41 422 aaPredicted RBP13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 ZNF343Q6P1L6 599 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 UNQ6494/PRO21346Q6UXR6 183 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 DPPA3Q6W0C5 159 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 HSD17B11Q8NBQ5 300 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 SEMA6DQ8NFY4 1073 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 FAM210BQ96KR6 192 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 HIST1H2BLQ99880 126 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 RARRES2Q99969 163 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 BANF2Q9H503 90 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 HRASLS2Q9NWW9 162 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 DKKL1Q9UK85 242 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 PADI1Q9ULC6 663 aa13.38□□□□□ -0.27
CLSTN1-205ENST00000477264 TMED7-TICAM2A0A0A6YYA0 188 aa13.37□□□□□ -0.27
CLSTN1-205ENST00000477264 ST8SIA3O43173 380 aa13.37□□□□□ -0.27
CLSTN1-205ENST00000477264 PITX3O75364 302 aa13.37□□□□□ -0.27
CLSTN1-205ENST00000477264 SCAF4O95104 1147 aaKnown RBP13.37□□□□□ -0.27
CLSTN1-205ENST00000477264 HPNP05981 417 aa13.37□□□□□ -0.27
CLSTN1-205ENST00000477264 HCKP08631 526 aa13.37□□□□□ -0.27
CLSTN1-205ENST00000477264 SFTPDP35247 375 aa13.37□□□□□ -0.27
CLSTN1-205ENST00000477264 RND3P61587 244 aa13.37□□□□□ -0.27
CLSTN1-205ENST00000477264 USF2Q15853 346 aaPredicted RBP13.37□□□□□ -0.27
CLSTN1-205ENST00000477264 GFI1BQ5VTD9 330 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms