RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 IGKV1D-17A0A075B6S4 117 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 A0A0G2JMP0 313 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 A0A0X1KG70 313 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 PNMA8CA0A1B0GUJ8 204 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 FUOMA2VDF0 154 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 TMPRSS2O15393 492 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 GATBO75879 557 aaKnown RBP8.05□□□□□ -1.12
HDAC3-208ENST00000476739 SERPINA3P01011 423 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 PGA5P0DJD9 388 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 MUC1P15941 1255 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-208ENST00000476739 ZNF20P17024 532 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 MPZP25189 248 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 AZGP1P25311 298 aaKnown RBP8.05□□□□□ -1.12
HDAC3-208ENST00000476739 CEBPDP49716 269 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-208ENST00000476739 FUT6P51993 359 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 RPS11P62280 158 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC3-208ENST00000476739 SLC35A2P78381 396 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 DCAF12L2Q5VW00 463 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 DMKNQ6E0U4 476 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-208ENST00000476739 ACP7Q6ZNF0 438 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 UTS2BQ765I0 119 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 NLRC3Q7RTR2 1065 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 SATL1Q86VE3 508 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 ZNF573Q86YE8 665 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 POC1AQ8NBT0 407 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 OR4M2Q8NGB6 313 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 OR13C9Q8NGT0 318 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 ANGPTL6Q8NI99 470 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 ZNF671Q8TAW3 534 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 CHPT1Q8WUD6 406 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 TSEN15Q8WW01 171 aaKnown RBP8.05□□□□□ -1.12
HDAC3-208ENST00000476739 PP6455Q8WZ26 134 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 C12orf43Q96C57 262 aaKnown RBP8.05□□□□□ -1.12
HDAC3-208ENST00000476739 SMIM19Q96E16 107 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 BORCS8Q96FH0 119 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 PGLYRP3Q96LB9 341 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 TECTBQ96PL2 329 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 GAFA1Q96PS6 74 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 OR5M11Q96RB7 305 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 COMMD4Q9H0A8 199 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 C7orf69Q9H7B7 122 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 MTCH1Q9NZJ7 389 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 NLKQ9UBE8 527 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 KAAG1Q9UBP8 84 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 DNAJB11Q9UBS4 358 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 CLN8Q9UBY8 286 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 ZNF222Q9UK12 451 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 SLC7A11Q9UPY5 501 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 DHDHQ9UQ10 334 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 INSIG2Q9Y5U4 225 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 NAV3Q8IVL0 2385 aa8.05□□□□□ -1.12
HDAC3-208ENST00000476739 hCG_2014768A0A024R1R8 64 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 PPIAL4CA0A0B4J2A2 164 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 IGHV2-70DA0A0C4DH43 119 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 OR2AT4A6NND4 320 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 DVL1O14640 695 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 MYL12BO14950 172 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 NDUFA2O43678 99 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 TFAP2AP05549 437 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 FAM157CP0CG43 387 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 CALCBP10092 127 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 PSG2P11465 335 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 SRD5A1P18405 259 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 CPT2P23786 658 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 CRHBPP24387 322 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 WNT4P56705 351 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 ERVK11-1P61568 191 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 IL24Q13007 206 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 IKZF1Q13422 519 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 IRF3Q14653 427 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 CNN3Q15417 329 aaKnown RBP8.04□□□□□ -1.12
HDAC3-208ENST00000476739 KCNJ8Q15842 424 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 DGUOKQ16854 277 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 RGS21Q2M5E4 152 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 ATPAF1Q5TC12 328 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-208ENST00000476739 RNLSQ5VYX0 342 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 ZNF788Q6ZQV5 615 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 SLC25A26Q70HW3 274 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 PARP16Q8N5Y8 322 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 CD177Q8N6Q3 437 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 OR51A2Q8NGJ7 313 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 HAVCR2Q8TDQ0 301 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 GHSRQ92847 366 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 SLAMF9Q96A28 289 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 RFT1Q96AA3 541 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 TMIGD2Q96BF3 282 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 OPALINQ96PE5 141 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 NKX3-1Q99801 234 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-208ENST00000476739 NRIP2Q9BQI9 281 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 CDCA4Q9BXL8 241 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 PKIBQ9C010 78 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 DUSP21Q9H596 190 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 ZCCHC4Q9H5U6 513 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 HES4Q9HCC6 221 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 TRIM36Q9NQ86 728 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 SCN3BQ9NY72 215 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 TAS2R4Q9NYW5 299 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 LPAR3Q9UBY5 353 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 OR5V1Q9UGF6 321 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 METRNQ9UJH8 293 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms