RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 DMRTB1Q96MA1 342 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 ERVK13-1Q9NX77 482 aa17.41■□□□□ 0.38
LIME1-204ENST00000476183 RPL36Q9Y3U8 105 aaKnown RBP17.41■□□□□ 0.38
LIME1-204ENST00000476183 IGHV1-69DA0A0B4J2H0 117 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 IGKV1-9A0A0C4DH69 117 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 F8VVB4 439 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 F8VWA3 439 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 NXPH2O95156 264 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 FADS2O95864 444 aaKnown RBP17.4■□□□□ 0.38
LIME1-204ENST00000476183 IGHV1-69P01742 117 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 PEX2P28328 305 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 COMPP49747 757 aaPredicted RBP17.4■□□□□ 0.38
LIME1-204ENST00000476183 FUT6P51993 359 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 IL24Q13007 206 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 ALKBH1Q13686 389 aaKnown RBP17.4■□□□□ 0.38
LIME1-204ENST00000476183 C12orf54Q6X4T0 127 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 SYS1Q8N2H4 156 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 KIR3DL3Q8N743 410 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 GATAD2BQ8WXI9 593 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 FGGYQ96C11 551 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 MTCH1Q9NZJ7 389 aa17.4■□□□□ 0.38
LIME1-204ENST00000476183 E9PI62 339 aa17.39■□□□□ 0.37
LIME1-204ENST00000476183 CLDN34H7C241 214 aa17.39■□□□□ 0.37
LIME1-204ENST00000476183 SERPINA3P01011 423 aa17.39■□□□□ 0.37
LIME1-204ENST00000476183 RNASE1P07998 156 aaKnown RBP17.39■□□□□ 0.37
LIME1-204ENST00000476183 PRDX2P32119 198 aa17.39■□□□□ 0.37
LIME1-204ENST00000476183 ZNF691Q5VV52 312 aa17.39■□□□□ 0.37
LIME1-204ENST00000476183 PP6455Q8WZ26 134 aa17.39■□□□□ 0.37
LIME1-204ENST00000476183 ZMAT3Q9HA38 289 aaKnown RBP17.39■□□□□ 0.37
LIME1-204ENST00000476183 SIRT7Q9NRC8 400 aa17.39■□□□□ 0.37
LIME1-204ENST00000476183 INPP5EQ9NRR6 644 aa17.39■□□□□ 0.37
LIME1-204ENST00000476183 HOXA3O43365 443 aaPredicted RBP17.38■□□□□ 0.37
LIME1-204ENST00000476183 PIP4P2Q8N4L2 257 aa17.38■□□□□ 0.37
LIME1-204ENST00000476183 CNIH3Q8TBE1 160 aa17.38■□□□□ 0.37
LIME1-204ENST00000476183 SLAMF9Q96A28 289 aa17.38■□□□□ 0.37
LIME1-204ENST00000476183 BORCS8Q96FH0 119 aa17.38■□□□□ 0.37
LIME1-204ENST00000476183 MRPL48Q96GC5 212 aaKnown RBP17.38■□□□□ 0.37
LIME1-204ENST00000476183 OR14J1Q9UGF5 321 aa17.38■□□□□ 0.37
LIME1-204ENST00000476183 HHLA2Q9UM44 414 aa17.38■□□□□ 0.37
LIME1-204ENST00000476183 A0A1W2PQ09 198 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 INMTO95050 263 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 LIMS3P0CW19 117 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 LIMS4P0CW20 117 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 ATF1P18846 271 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 CAPZA1P52907 286 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 CNN3Q15417 329 aaKnown RBP17.37■□□□□ 0.37
LIME1-204ENST00000476183 KLHL22Q53GT1 634 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 Q6YL49 198 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 SLC25A26Q70HW3 274 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 UTS2BQ765I0 119 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 CMTM4Q8IZR5 234 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 ZNF561Q8N587 486 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 PACRGLQ8N7B6 248 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 ZNF676Q8N7Q3 588 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 DNAAF1Q8NEP3 725 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 CYGBQ8WWM9 190 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 TAF15Q92804 592 aaKnown RBP eCLIP17.37■□□□□ 0.37
LIME1-204ENST00000476183 TNFRSF14Q92956 283 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 ZDHHC16Q969W1 377 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 SLC25A28Q96A46 364 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 FGF20Q9NP95 211 aaPredicted RBP17.37■□□□□ 0.37
LIME1-204ENST00000476183 C19orf12Q9NSK7 152 aa17.37■□□□□ 0.37
LIME1-204ENST00000476183 A0A0U1RQK1 487 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 RNASEK-C17orf49H0YIS7 233 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 KNG1P01042 644 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 HKR1P10072 659 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 ZNF20P17024 532 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 AZGP1P25311 298 aaKnown RBP17.36■□□□□ 0.37
LIME1-204ENST00000476183 CFPP27918 469 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 ADARB1P78563 741 aaKnown RBP17.36■□□□□ 0.37
LIME1-204ENST00000476183 KLRD1Q13241 179 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 METAP1DQ6UB28 335 aaPredicted RBP17.36■□□□□ 0.37
LIME1-204ENST00000476183 RNF144BQ7Z419 303 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 EGFL6Q8IUX8 553 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 OR13C3Q8NGS6 347 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 CEP19Q96LK0 163 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 JAM3Q9BX67 310 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 NOX4Q9NPH5 578 aa17.36■□□□□ 0.37
LIME1-204ENST00000476183 TRBV23-1A0A0A0MS06 115 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 M0R1W7 72 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 SLC1A7O00341 560 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 ZFPL1O95159 310 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 MELTFP08582 738 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 RBP2P50120 134 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 AWAT1Q58HT5 328 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 TTC23Q5W5X9 447 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 C1orf122Q6ZSJ8 110 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 FAM185AQ8N0U4 392 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 MYCBPQ99417 103 aaPredicted RBP17.35■□□□□ 0.37
LIME1-204ENST00000476183 PDCD1LG2Q9BQ51 273 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 C8orf4Q9NR00 106 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 IL36RNQ9UBH0 155 aa17.35■□□□□ 0.37
LIME1-204ENST00000476183 ETV1P50549 477 aa17.34■□□□□ 0.37
LIME1-204ENST00000476183 GTF2A1P52655 376 aaPredicted RBP17.34■□□□□ 0.37
LIME1-204ENST00000476183 ATP1B3P54709 279 aa17.34■□□□□ 0.37
LIME1-204ENST00000476183 MTCP1P56278 107 aa17.34■□□□□ 0.37
LIME1-204ENST00000476183 OGFRL1Q5TC84 451 aaPredicted RBP17.34■□□□□ 0.37
LIME1-204ENST00000476183 DHRSXQ8N5I4 330 aa17.34■□□□□ 0.37
LIME1-204ENST00000476183 OR4M1Q8NGD0 313 aa17.34■□□□□ 0.37
LIME1-204ENST00000476183 TNFRSF19Q9NS68 423 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms