RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CD33P20138 364 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 RAB13P51153 203 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 DYNLT3P51808 116 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 ESRRGP62508 458 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 MS4A2Q01362 244 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 ROM1Q03395 351 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 SSX2Q16385 188 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 ZNF626Q68DY1 528 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 TMEM219Q86XT9 240 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 DYNAPQ8N1N2 210 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 ASCC1Q8N9N2 400 aaKnown RBP8.74□□□□□ -1.01
CDRT1-205ENST00000475944 OR11H6Q8NGC7 330 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 WIPF2Q8TF74 440 aaPredicted RBP8.74□□□□□ -1.01
CDRT1-205ENST00000475944 ASB9Q96DX5 294 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 OR5M11Q96RB7 305 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 CHID1Q9BWS9 393 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 WNT10AQ9GZT5 417 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 MOB1AQ9H8S9 216 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 HES4Q9HCC6 221 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 IKZF2Q9UKS7 526 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 GTF2A1LQ9UNN4 478 aa8.74□□□□□ -1.01
CDRT1-205ENST00000475944 ADARB2-AS1A8MUL3 147 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 LOC110117498-PIK3R3F6TDL0 507 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 H3BUI4 141 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 K7N7A8 449 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 F2RL2O00254 374 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 E2F6O75461 281 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 TTRP02766 147 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 MRPL3P09001 348 aaKnown RBP8.73□□□□□ -1.01
CDRT1-205ENST00000475944 ANXA8P13928 327 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 HOXB6P17509 224 aaKnown RBP8.73□□□□□ -1.01
CDRT1-205ENST00000475944 MPZP25189 248 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 VDAC2P45880 294 aaPredicted RBP8.73□□□□□ -1.01
CDRT1-205ENST00000475944 DLX6P56179 175 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 EDDM3BP56851 147 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 OR12D2P58182 307 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 ACTR3P61158 418 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 MFGE8Q08431 387 aaPredicted RBP8.73□□□□□ -1.01
CDRT1-205ENST00000475944 DYNC1I2Q13409 638 aaKnown RBP8.73□□□□□ -1.01
CDRT1-205ENST00000475944 SNAPC1Q16533 368 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 TMEM42Q69YG0 159 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 ASRGL1Q7L266 308 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 GDPD3Q7L5L3 318 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 PIGWQ7Z7B1 504 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 TMEM179BQ7Z7N9 219 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 TTTY10Q9BZA0 68 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 SLC25A19Q9HC21 320 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 GPR173Q9NS66 373 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 SLC22A13Q9Y226 551 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 V9GYS6 101 aa8.73□□□□□ -1.01
CDRT1-205ENST00000475944 CCDC182A6NF36 153 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 DHRS7CA6NNS2 312 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 CHRM2P08172 466 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 IGHV1-8P0DP01 117 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 PF4V1P10720 104 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 AZGP1P25311 298 aaKnown RBP8.72□□□□□ -1.01
CDRT1-205ENST00000475944 ERVK11-1P61568 191 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 COL10A1Q03692 680 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 IL24Q13007 206 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 BCL2L15Q5TBC7 163 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 MINOS1Q5TGZ0 78 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 FOXB2Q5VYV0 432 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 TMEM236Q5W0B7 351 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 ELMOD2Q8IZ81 293 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 ADGRG5Q8IZF4 528 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 OR8H2Q8N162 312 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 BATF2Q8N1L9 274 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 NDNFQ8TB73 568 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 CCDC124Q96CT7 223 aaKnown RBP8.72□□□□□ -1.01
CDRT1-205ENST00000475944 NSL1Q96IY1 281 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 ZNF714Q96N38 554 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 CNN2Q99439 309 aaKnown RBP8.72□□□□□ -1.01
CDRT1-205ENST00000475944 PKIBQ9C010 78 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 TVP23BQ9NYZ1 205 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 DNAJB9Q9UBS3 223 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 COPS3Q9UNS2 423 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 MINOS1-NBL1R4GNA1 71 aa8.72□□□□□ -1.01
CDRT1-205ENST00000475944 PRR32B1ATL7 298 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 ATP8B1O43520 1251 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 SRSF10O75494 262 aaKnown RBP8.71□□□□□ -1.02
CDRT1-205ENST00000475944 DNAJC8O75937 253 aaPredicted RBP8.71□□□□□ -1.02
CDRT1-205ENST00000475944 CALB2P22676 271 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 ACTA2P62736 377 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 BLCAPP62952 87 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 GNGT1P63211 74 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 ACTG2P63267 376 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 ACTC1P68032 377 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 ACTA1P68133 377 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 MEF2CQ06413 473 aaPredicted RBP8.71□□□□□ -1.02
CDRT1-205ENST00000475944 SLC34A1Q06495 639 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 LDLRAD2Q5SZI1 272 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 ZNF322Q6U7Q0 402 aaPredicted RBP8.71□□□□□ -1.02
CDRT1-205ENST00000475944 ANGPTL5Q86XS5 388 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 HS3ST5Q8IZT8 346 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 WFDC9Q8NEX5 89 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 OR5AU1Q8NGC0 362 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 OR14K1Q8NGZ2 314 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 TRMT10AQ8TBZ6 339 aaKnown RBP8.71□□□□□ -1.02
CDRT1-205ENST00000475944 CANT1Q8WVQ1 401 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 DNAJC9Q8WXX5 260 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms