RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SLC25A22Q9H936 323 aa9.77□□□□□ -0.84
VAPB-204ENST00000475243 F5H697 171 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 ACSM4P0C7M7 580 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 TRAPPC2P0DI81 140 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 TRAPPC2BP0DI82 140 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 FABP4P15090 132 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 RTP5Q14D33 572 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 DNAJB12Q9NXW2 375 aaKnown RBP9.77□□□□□ -0.85
VAPB-204ENST00000475243 IL36GQ9NZH8 169 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 TO15178 435 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 CDKN2AP42771 156 aaKnown RBP9.77□□□□□ -0.85
VAPB-204ENST00000475243 PAX5Q02548 391 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 MRGPRDQ8TDS7 321 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 RBM14Q96PK6 669 aaKnown RBP9.77□□□□□ -0.85
VAPB-204ENST00000475243 HSD17B10Q99714 261 aaKnown RBP9.77□□□□□ -0.85
VAPB-204ENST00000475243 OR2D2Q9H210 308 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 KCNK15Q9H427 330 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 UCK1Q9HA47 277 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 OR1A1Q9P1Q5 309 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 IL9P15248 144 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 C11orf87Q6NUJ2 197 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 TMEM108Q6UXF1 575 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 COMMD1Q8N668 190 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 OR4D9Q8NGE8 314 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 TMEM147Q9BVK8 224 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 ADAMTSL1Q8N6G6 1762 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 COL11A1P12107 1806 aaPredicted RBP9.77□□□□□ -0.85
VAPB-204ENST00000475243 ARAP2Q8WZ64 1704 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 DHRS3O75911 302 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 ZFPL1O95159 310 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 GYPAP02724 150 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 SLC25A5P05141 298 aaKnown RBP9.77□□□□□ -0.85
VAPB-204ENST00000475243 TMIGD3P0DMS9 266 aaPredicted RBP9.77□□□□□ -0.85
VAPB-204ENST00000475243 APELAP0DMC3 54 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 AMTP48728 403 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 CBLN3Q6UW01 205 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 TMEM56Q96MV1 263 aa9.77□□□□□ -0.85
VAPB-204ENST00000475243 AKAP6Q13023 2319 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 PMCHP20382 165 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 ETFDHQ16134 617 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 MOGAT1Q96PD6 335 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 TSPAN32Q96QS1 320 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 RHOFQ9HBH0 211 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 LPAR6P43657 344 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 CLEC9AQ6UXN8 241 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 SPSB1Q96BD6 273 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 MED30Q96HR3 178 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 ZMIZ1Q9ULJ6 1067 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 FER1L5A0AVI2 2057 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 HRASP01112 189 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 CISD3P0C7P0 127 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 ORM2P19652 201 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 CALCRP30988 508 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 KLF3P57682 345 aaPredicted RBP9.76□□□□□ -0.85
VAPB-204ENST00000475243 FAM109BQ6ICB4 259 aaPredicted RBP9.76□□□□□ -0.85
VAPB-204ENST00000475243 ZNF574Q6ZN55 896 aaPredicted RBP9.76□□□□□ -0.85
VAPB-204ENST00000475243 CALHM3Q86XJ0 350 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 SMIM4Q8WVI0 70 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 C4orf45Q96LM5 186 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 MSL2Q9HCI7 577 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 ATAD5Q96QE3 1844 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 ALX3O95076 343 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 NKX2-2O95096 273 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 ZNF260Q3ZCT1 412 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 GVQW1Q8N7I0 195 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 LRRC29Q8WV35 223 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 TMEM208Q9BTX3 173 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 OCIAD1Q9NX40 245 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 COL22A1Q8NFW1 1626 aaPredicted RBP9.76□□□□□ -0.85
VAPB-204ENST00000475243 PLPP3O14495 311 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 VAMP3Q15836 100 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 CNTD2Q9H8S5 307 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 UBTD1Q9HAC8 227 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 ARFGEF1Q9Y6D6 1849 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 A0A1W2PNV4 684 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 CYR61O00622 381 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 SPP1P10451 314 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 WNT3P56703 355 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 TMEM65Q6PI78 240 aa9.76□□□□□ -0.85
VAPB-204ENST00000475243 BCL2L11O43521 198 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 FBP1P09467 338 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 PJVKQ0ZLH3 352 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 TOMM34Q15785 309 aaPredicted RBP9.75□□□□□ -0.85
VAPB-204ENST00000475243 J3KRW8 73 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 MBTPS2O43462 519 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 AGFG2O95081 481 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 CT55Q8WUE5 264 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 ABHD14AQ9BUJ0 271 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 LINC01387J3KSC0 135 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 OR5AC1P0C628 307 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 FGF8P55075 233 aaPredicted RBP9.75□□□□□ -0.85
VAPB-204ENST00000475243 FNDC7Q5VTL7 733 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 CHRDL1Q9BU40 450 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 ZFP64Q9NPA5 681 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 RALGAPA1Q6GYQ0 2036 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 SCGB1C2P0DMR2 95 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 Q8IYB0 196 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms