RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MGLLQ99685 303 aa14.1□□□□□ -0.15
SCAF11-206ENST00000474828 PCDHB10Q9UN67 800 aa14.1□□□□□ -0.15
SCAF11-206ENST00000474828 FOXJ3Q9UPW0 622 aa14.1□□□□□ -0.15
SCAF11-206ENST00000474828 SF3B6Q9Y3B4 125 aaKnown RBP14.1□□□□□ -0.15
SCAF11-206ENST00000474828 IGKV1D-17A0A075B6S4 117 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 RPS2P15880 293 aaKnown RBP14.09□□□□□ -0.15
SCAF11-206ENST00000474828 RAB3AP20336 220 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 GLRA1P23415 457 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 MAP2K4P45985 399 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 SOX2P48431 317 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 GP2P55259 537 aaKnown RBP14.09□□□□□ -0.15
SCAF11-206ENST00000474828 MTCP1P56278 107 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 KISS1Q15726 138 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 WDR25Q64LD2 544 aaPredicted RBP14.09□□□□□ -0.15
SCAF11-206ENST00000474828 NLRC3Q7RTR2 1065 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 ZNF367Q7RTV3 350 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 RNF144BQ7Z419 303 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 GLCCI1Q86VQ1 547 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 CDH26Q8IXH8 852 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 OR8B3Q8NGG8 313 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 OR51A2Q8NGJ7 313 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 NPRL2Q8WTW4 380 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 DMRTB1Q96MA1 342 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 OR8B2Q96RD0 313 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 CCDC90BQ9GZT6 254 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 TMEM138Q9NPI0 162 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 NLKQ9UBE8 527 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 MALRD1Q5VYJ5 2156 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 MXRA5Q9NR99 2828 aa14.09□□□□□ -0.15
SCAF11-206ENST00000474828 OR2AT4A6NND4 320 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 F8VVB4 439 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 F8VWA3 439 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 TRAPPC2LH3BP13 241 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 J3QLI3 93 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 GPR37O15354 613 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 GYPAP02724 150 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 PSG2P11465 335 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 EEF1B2P24534 225 aaKnown RBP14.08□□□□□ -0.16
SCAF11-206ENST00000474828 PITPNBP48739 271 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 ESCO2Q56NI9 601 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 ZNF773Q6PK81 442 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 PHC2Q8IXK0 858 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 MKXQ8IYA7 352 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 Q8IYB0 196 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 SVOPQ8N4V2 548 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 PXT1Q8NFP0 134 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 UFD1Q92890 307 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 TMIGD2Q96BF3 282 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 CEP19Q96LK0 163 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 OR14A2Q96R54 314 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 SSBP3Q9BWW4 388 aaPredicted RBP14.08□□□□□ -0.16
SCAF11-206ENST00000474828 HIF1ANQ9NWT6 349 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 TAS2R4Q9NYW5 299 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 KCNS2Q9ULS6 477 aa14.08□□□□□ -0.16
SCAF11-206ENST00000474828 TRAV8-7A0A075B6U6 113 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 IGHV3OR15-7A0A075B7D8 119 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 IGKV1-12A0A0C4DH73 117 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 SIGLEC5O15389 551 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 ADAM20O43506 726 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 KDM4BO94953 1096 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 KNG1P01042 644 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 IGKV1D-12P01611 117 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 PSMA1P25786 263 aaKnown RBP14.07□□□□□ -0.16
SCAF11-206ENST00000474828 MAPK3P27361 379 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-206ENST00000474828 TRAM1Q15629 374 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 SMIM21Q3B7S5 101 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 CD200R1LQ6Q8B3 271 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 SLC25A26Q70HW3 274 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 SLC36A1Q7Z2H8 476 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 BOLLQ8N9W6 283 aaKnown RBP14.07□□□□□ -0.16
SCAF11-206ENST00000474828 PHYHIPQ92561 330 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 CPNE2Q96FN4 548 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-206ENST00000474828 ZNF488Q96MN9 340 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 GAFA1Q96PS6 74 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 SMURF1Q9HCE7 757 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 YAE1D1Q9NRH1 226 aa14.07□□□□□ -0.16
SCAF11-206ENST00000474828 PNMA8CA0A1B0GUJ8 204 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 INAFM1C9JVW0 142 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 CRLF1O75462 422 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 UCHL1P09936 223 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 TGFBR2P37173 567 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 ZNF146Q15072 292 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 SSX1Q16384 188 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 ACSM3Q53FZ2 586 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 LIPKQ5VXJ0 399 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 ELP2Q6IA86 826 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 TMEM91Q6ZNR0 172 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 Q71RC1 249 aaPredicted RBP14.06□□□□□ -0.16
SCAF11-206ENST00000474828 OR52N4Q8NGI2 321 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 FCGR1BQ92637 280 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 MED30Q96HR3 178 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 CCL13Q99616 98 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 CLN8Q9UBY8 286 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 MAB21L2Q9Y586 359 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 INSIG2Q9Y5U4 225 aa14.06□□□□□ -0.16
SCAF11-206ENST00000474828 SONP18583 2426 aaKnown RBP14.05□□□□□ -0.16
SCAF11-206ENST00000474828 KIR2DS1A0A191URI9 304 aa14.05□□□□□ -0.16
SCAF11-206ENST00000474828 A0A1B0GW55 424 aa14.05□□□□□ -0.16
SCAF11-206ENST00000474828 TRIM64CA6NLI5 447 aa14.05□□□□□ -0.16
SCAF11-206ENST00000474828 GABRPO00591 440 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms