RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PRKACBP22694 351 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 PSMB9P28065 219 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 GABRA5P31644 462 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 CD80P33681 288 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 GPR6P46095 362 aaPredicted RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 NPBWR2P48146 333 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 MTCP1P56278 107 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 SEC61A1P61619 476 aaKnown RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 LOXL1Q08397 574 aaPredicted RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 PDZK1IP1Q13113 114 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 KISS1Q15726 138 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 TEX36Q5VZQ5 186 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 SFRP4Q6FHJ7 346 aaPredicted RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 DUX4L9Q6RFH8 374 aaPredicted RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 LYPD2Q6UXB3 125 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 C12orf54Q6X4T0 127 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 ASCL4Q6XD76 172 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 SLC25A26Q70HW3 274 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 CEACAM19Q7Z692 300 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 NR2C2APQ86WQ0 139 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 BATF2Q8N1L9 274 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 MS4A15Q8N5U1 240 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 BOLLQ8N9W6 283 aaKnown RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 DEFB108BQ8NET1 73 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 OR5D18Q8NGL1 313 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 OR5D14Q8NGL3 314 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 OR10Z1Q8NGY1 313 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 CLDND2Q8NHS1 167 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 FCGR1BQ92637 280 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 SPSB1Q96BD6 273 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 TMIGD2Q96BF3 282 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 C1orf159Q96HA4 380 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 C1orf147Q96MC9 270 aaPredicted RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 HIST1H2AAQ96QV6 131 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 NRIP2Q9BQI9 281 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 TMEM246Q9BRR3 403 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 PIMREGQ9BSJ6 248 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 PKIBQ9C010 78 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 HES4Q9HCC6 221 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 IL36RNQ9UBH0 155 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 CTSZQ9UBR2 303 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 DUX4Q9UBX2 424 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF222Q9UK12 451 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 SLC7A11Q9UPY5 501 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 IGKV1D-17A0A075B6S4 117 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 PPIAL4EA0A075B759 164 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 TRDV1A0A1B0GX56 115 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 hCG_1807616A0A1W2PRN6 198 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 OOEPA6NGQ2 149 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 CEACAM18A8MTB9 384 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 A8MV72 311 aaPredicted RBP5.82□□□□□ -1.48
LIMD1-204ENST00000474665 FAM157AC9JC47 383 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 PPIAL4DF5H284 164 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 LGALS8O00214 317 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 CCRL2O00421 344 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 ANGPTL7O43827 346 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 CD5LO43866 347 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 RGS9O75916 674 aaPredicted RBP5.82□□□□□ -1.48
LIMD1-204ENST00000474665 PLATP00750 562 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 SERPINA3P01011 423 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 IGHV2-5P01817 119 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 ALDOBP05062 364 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 TFAP2AP05549 437 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 CD2P06729 351 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 SFTPBP07988 381 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 WNT2P09544 360 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 PPIAL4FP0DN26 164 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 SELLP14151 372 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 SRMP19623 302 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 RAB3AP20336 220 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 GADD45AP24522 165 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 ZFP36P26651 326 aaKnown RBP5.82□□□□□ -1.48
LIMD1-204ENST00000474665 MDH2P40926 338 aaKnown RBP5.82□□□□□ -1.48
LIMD1-204ENST00000474665 OR3A4PP47883 348 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 RBP2P50120 134 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 GMFBP60983 142 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 MZT1Q08AG7 82 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 IL24Q13007 206 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 CNN3Q15417 329 aaKnown RBP5.82□□□□□ -1.48
LIMD1-204ENST00000474665 TMEM249Q2WGJ8 235 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF404Q494X3 552 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 TMEM155Q4W5P6 130 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF841Q6ZN19 808 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 ACP7Q6ZNF0 438 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF573Q86YE8 665 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 FGFRL1Q8N441 504 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 CD177Q8N6Q3 437 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 POC1AQ8NBT0 407 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 OR5T2Q8NGG2 359 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 OR11L1Q8NGX0 322 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 ANGPTL6Q8NI99 470 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 RAB1CQ92928 201 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 SLAMF9Q96A28 289 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 YIPF6Q96EC8 236 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 BORCS8Q96FH0 119 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 CYYR1Q96J86 154 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 TECTBQ96PL2 329 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 OR51E2Q9H255 320 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 RNF167Q9H6Y7 350 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 SMURF1Q9HCE7 757 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms