RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CNOT4O95628 575 aaKnown RBP8.45□□□□□ -1.06
USP39-214ENST00000474572 SFTPBP07988 381 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 FCGR3AP08637 254 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 HOXB1P14653 301 aaPredicted RBP8.45□□□□□ -1.06
USP39-214ENST00000474572 RPS2P15880 293 aaKnown RBP8.45□□□□□ -1.06
USP39-214ENST00000474572 S100A11P31949 105 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 APLNRP35414 380 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 WNT5AP41221 380 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 RBM11P57052 281 aaKnown RBP8.45□□□□□ -1.06
USP39-214ENST00000474572 IL13RA1P78552 427 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 FGL1Q08830 312 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 PRDX4Q13162 271 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 EXOSC2Q13868 293 aaKnown RBP8.45□□□□□ -1.06
USP39-214ENST00000474572 TAF9Q16594 264 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 CEACAM21Q3KPI0 293 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 CLLU1Q5K131 121 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 MRPL21Q7Z2W9 205 aaKnown RBP8.45□□□□□ -1.06
USP39-214ENST00000474572 CALHM1Q8IU99 346 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 ZDHHC23Q8IYP9 409 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 OR10AD1Q8NGE0 317 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 PHB2Q99623 299 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 DHRS9Q9BPW9 319 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 RTBDNQ9BSG5 229 aaPredicted RBP8.45□□□□□ -1.06
USP39-214ENST00000474572 DPCDQ9BVM2 203 aaPredicted RBP8.45□□□□□ -1.06
USP39-214ENST00000474572 CLEC4MQ9H2X3 399 aaPredicted RBP8.45□□□□□ -1.06
USP39-214ENST00000474572 C12orf49Q9H741 205 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 PLEKHJ1Q9NW61 149 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 CRIM1Q9NZV1 1036 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 AK3Q9UIJ7 227 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 WDR87Q6ZQQ6 2873 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 MUC3AQ02505 3323 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 FRYLO94915 3013 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 ZNF407Q9C0G0 2248 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 OR5H14A6NHG9 310 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 CD300LBA8K4G0 201 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 GEMIN2O14893 280 aaKnown RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 TPD52L2O43399 206 aaKnown RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 PDCD6O75340 191 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 CFDP00746 253 aaPredicted RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 NGFP01138 241 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 IFNA7P01567 189 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 ZNF14P17017 642 aaPredicted RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 COX5AP20674 150 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 CALCRP30988 508 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 OR3A3P47888 321 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 GMFBP60983 142 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 FGF12P61328 243 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 SUPT4H1P63272 117 aaKnown RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 SORDQ00796 357 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 HLXQ14774 488 aaPredicted RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 SRSF7Q16629 238 aaKnown RBP eCLIP8.44□□□□□ -1.06
USP39-214ENST00000474572 HIKESHIQ53FT3 197 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 C11orf88Q6PI97 169 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 IGFL3Q6UXB1 125 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 Q6ZS49 121 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 CCDC36Q8IYA8 594 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 FBXL14Q8N1E6 418 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 ZNF611Q8N823 705 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 OR5A2Q8NGI9 324 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 CMSS1Q9BQ75 279 aaKnown RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 SULT4A1Q9BR01 284 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 HDHD3Q9BSH5 251 aaPredicted RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 ST6GALNAC5Q9BVH7 336 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 DLL3Q9NYJ7 618 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 EHFQ9NZC4 300 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 ZNF581Q9P0T4 197 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 RCC2Q9P258 522 aaKnown RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 UBQLN2Q9UHD9 624 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 ZNF230Q9UIE0 474 aaPredicted RBP8.44□□□□□ -1.06
USP39-214ENST00000474572 ANXA10Q9UJ72 324 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 MAB21L2Q9Y586 359 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 MPC1Q9Y5U8 109 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 KCNMB2Q9Y691 235 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 MED12LQ86YW9 2145 aa8.44□□□□□ -1.06
USP39-214ENST00000474572 A0A0C4DFX4 3053 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 OR5B21A6NL26 309 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 ARPC5O15511 151 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 B3GALNT1O75752 331 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 PLATP00750 562 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 CTSDP07339 412 aaPredicted RBP8.43□□□□□ -1.06
USP39-214ENST00000474572 CCL2P13500 99 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 IGHV1-2P23083 117 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 NPY4RP50391 375 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 ZNF345Q14585 488 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 GABRA6Q16445 453 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 MPV17LQ2QL34 196 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 PIGYQ3MUY2 71 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 CHRFAM7AQ494W8 412 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 NKAPLQ5M9Q1 402 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 TMEM211Q6ICI0 200 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 LIN54Q6MZP7 749 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 C11orf87Q6NUJ2 197 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 FBXW12Q6X9E4 464 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 Q6ZT83 130 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 RFPL4BQ6ZWI9 263 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 SLC25A26Q70HW3 274 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 TMUB2Q71RG4 321 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 FAM214BQ7L5A3 538 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 P4HA3Q7Z4N8 544 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 MDP1Q86V88 176 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms