RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 IGKV1D-17A0A075B6S4 117 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 A0A1W2PP11 408 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 F5H0A9 414 aaPredicted RBP8.66□□□□□ -1.02
CASC3-204ENST00000474190 LDLRAD4O15165 306 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 CDRT1O95170 752 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 BCL3P20749 454 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 PTGFRP43088 359 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 PDLIM4P50479 330 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 ATP1B3P54709 279 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 CAV3P56539 151 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 NCS1P62166 190 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 KRTAP1-1Q07627 177 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 BLMHQ13867 455 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 ZNF404Q494X3 552 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 AVPI1Q5T686 147 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 GPR107Q5VW38 600 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 FOXB2Q5VYV0 432 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 STUMQ69YW2 141 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 LYPD2Q6UXB3 125 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 ZNF841Q6ZN19 808 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 GDPGP1Q6ZNW5 385 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 CDH26Q8IXH8 852 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 SAXO1Q8IYX7 474 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 PXT1Q8NFP0 134 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 SLAMF9Q96A28 289 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 HIST1H2AAQ96QV6 131 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 KCNK15Q9H427 330 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 MYOZ1Q9NP98 299 aaPredicted RBP8.66□□□□□ -1.02
CASC3-204ENST00000474190 RBFOX1Q9NWB1 397 aaKnown RBP8.66□□□□□ -1.02
CASC3-204ENST00000474190 CTSZQ9UBR2 303 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 SLC7A11Q9UPY5 501 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 NPTNQ9Y639 398 aa8.66□□□□□ -1.02
CASC3-204ENST00000474190 IGHV3OR15-7A0A075B7D8 119 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 A0A0B4J203 849 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 LOC100506127A0A0U1RQW1 187 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 SMIM30A4D0T7 59 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 A6NLC8 198 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 IFNL4K9M1U5 179 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 LGALS8O00214 317 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 NDUFS8O00217 210 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 TPD52L2O43399 206 aaKnown RBP8.65□□□□□ -1.02
CASC3-204ENST00000474190 AIREO43918 545 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 ARL6IP5O75915 188 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 PLATP00750 562 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 SDC2P34741 201 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 ZNF93P35789 620 aaPredicted RBP8.65□□□□□ -1.02
CASC3-204ENST00000474190 RPS19P39019 145 aaKnown RBP8.65□□□□□ -1.02
CASC3-204ENST00000474190 MTNR1BP49286 362 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 POU3F4P49335 361 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 VBP1P61758 197 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 LSM3P62310 102 aaKnown RBP8.65□□□□□ -1.02
CASC3-204ENST00000474190 BTG1P62324 171 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 PPP3R1P63098 170 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 MZT1Q08AG7 82 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 HFEQ30201 348 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 ATPAF1Q5TC12 328 aaPredicted RBP8.65□□□□□ -1.02
CASC3-204ENST00000474190 SHEQ5VZ18 495 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 SFRP4Q6FHJ7 346 aaPredicted RBP8.65□□□□□ -1.02
CASC3-204ENST00000474190 ELP2Q6IA86 826 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 ACP7Q6ZNF0 438 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 FGFRL1Q8N441 504 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 CD177Q8N6Q3 437 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 ZSCAN4Q8NAM6 433 aaPredicted RBP8.65□□□□□ -1.02
CASC3-204ENST00000474190 TMEM104Q8NE00 496 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 OR10K1Q8NGX5 313 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 ANGPTL6Q8NI99 470 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 FAM168AQ92567 244 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 THRSPQ92748 146 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 C1orf159Q96HA4 380 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 Q96MF0 132 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 TMEM246Q9BRR3 403 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 BARHL1Q9BZE3 327 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 VCX3AQ9NNX9 186 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 IL36GQ9NZH8 169 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 SSR3Q9UNL2 185 aa8.65□□□□□ -1.02
CASC3-204ENST00000474190 CHD3Q12873 2000 aaKnown RBP8.64□□□□□ -1.03
CASC3-204ENST00000474190 CLDN25C9JDP6 229 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 SLC17A2O00624 439 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 PPIHO43447 177 aaKnown RBP8.64□□□□□ -1.03
CASC3-204ENST00000474190 ERCC1P07992 297 aaPredicted RBP8.64□□□□□ -1.03
CASC3-204ENST00000474190 HCKP08631 526 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 CALCBP10092 127 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 PSG2P11465 335 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 SELLP14151 372 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 GPR6P46095 362 aaPredicted RBP8.64□□□□□ -1.03
CASC3-204ENST00000474190 DSCR9P59020 149 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 SEC61A1P61619 476 aaKnown RBP8.64□□□□□ -1.03
CASC3-204ENST00000474190 UNC119Q13432 240 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 SPCS2Q15005 226 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 TMEM155Q4W5P6 130 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 Q6P435 159 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 METAP1DQ6UB28 335 aaPredicted RBP8.64□□□□□ -1.03
CASC3-204ENST00000474190 RTN4RL2Q86UN3 420 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 NKAIN3Q8N8D7 197 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 OR5T2Q8NGG2 359 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 OR51F2Q8NH61 342 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 CLDND2Q8NHS1 167 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 NDNFQ8TB73 568 aa8.64□□□□□ -1.03
CASC3-204ENST00000474190 TNFAIP8L1Q8WVP5 186 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms