RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 IL24Q13007 206 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 ZSCAN26Q16670 478 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 TMEM244Q5VVB8 128 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 FDX2Q6P4F2 183 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 C16orf87Q6PH81 154 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 LHFPL3Q86UP9 236 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 APH1BQ8WW43 257 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 TNFRSF14Q92956 283 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 C10orf35Q96D05 121 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 PELI1Q96FA3 418 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 BORCS8Q96FH0 119 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 ALG8Q9BVK2 526 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 OR14J1Q9UGF5 321 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 A0A1W2PRD5 423 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 A0A1W2PRF3 423 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 A0A1W2PRM7 423 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 INMTO95050 263 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 PRDX2P32119 198 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 FUT6P51993 359 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 ACTA2P62736 377 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 ACTG2P63267 376 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 FAM185AQ8N0U4 392 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 ZNF561Q8N587 486 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 OR10AC1Q8NH08 325 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 STMN2Q93045 179 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 ZNF649Q9BS31 505 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 C19orf12Q9NSK7 152 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 MTCH1Q9NZJ7 389 aa14.71□□□□□ -0.05
UPF3A-203ENST00000474056 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.71□□□□□ -0.05
UPF3A-203ENST00000474056 TRBV23-1A0A0A0MS06 115 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 IGKV1-9A0A0C4DH69 117 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 F8VVB4 439 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 F8VWA3 439 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 M0R1W7 72 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 SLC1A7O00341 560 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 SERPINA3P01011 423 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 IGHA1P01876 353 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 ISG15P05161 165 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 CCR9P51686 369 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 ALKBH1Q13686 389 aaKnown RBP14.7□□□□□ -0.06
UPF3A-203ENST00000474056 GALEQ14376 348 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 CNN3Q15417 329 aaKnown RBP14.7□□□□□ -0.06
UPF3A-203ENST00000474056 PNKDQ8N490 385 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 OR51A4Q8NGJ6 313 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 PP6455Q8WZ26 134 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 SLAMF9Q96A28 289 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 FGGYQ96C11 551 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 Q96MT0 163 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 CHIAQ9BZP6 476 aa14.7□□□□□ -0.06
UPF3A-203ENST00000474056 ISG20L2Q9H9L3 353 aaKnown RBP14.7□□□□□ -0.06
UPF3A-203ENST00000474056 SMPD3Q9NY59 655 aaPredicted RBP14.7□□□□□ -0.06
UPF3A-203ENST00000474056 FAM181BA6NEQ2 426 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 OR4C45A6NMZ5 311 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 KNG1P01042 644 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 ZNF20P17024 532 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 GUCA2AQ02747 115 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 FIP1L1Q6UN15 594 aaKnown RBP14.69□□□□□ -0.06
UPF3A-203ENST00000474056 C1orf122Q6ZSJ8 110 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 LDLRAD3Q86YD5 345 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 TMEM86BQ8N661 226 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 OR52I1Q8NGK6 324 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 MRPL48Q96GC5 212 aaKnown RBP14.69□□□□□ -0.06
UPF3A-203ENST00000474056 CEP19Q96LK0 163 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 UNKLQ9H9P5 680 aaKnown RBP14.69□□□□□ -0.06
UPF3A-203ENST00000474056 ERVK13-1Q9NX77 482 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 HHLA2Q9UM44 414 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 KIAA2026Q5HYC2 2103 aa14.69□□□□□ -0.06
UPF3A-203ENST00000474056 NPFFO15130 113 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 WBP4O75554 376 aaKnown RBP14.68□□□□□ -0.06
UPF3A-203ENST00000474056 FADS2O95864 444 aaKnown RBP14.68□□□□□ -0.06
UPF3A-203ENST00000474056 ATF1P18846 271 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 OMGP23515 440 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 AZGP1P25311 298 aaKnown RBP14.68□□□□□ -0.06
UPF3A-203ENST00000474056 POU3F4P49335 361 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 RBP2P50120 134 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 RAB40BQ12829 278 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 SMN1Q16637 294 aaKnown RBP14.68□□□□□ -0.06
UPF3A-203ENST00000474056 SLC25A26Q70HW3 274 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 UTS2BQ765I0 119 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 SYS1Q8N2H4 156 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 ZNF676Q8N7Q3 588 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 DNAAF1Q8NEP3 725 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 ZNF555Q8NEP9 628 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 OR4M1Q8NGD0 313 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 SSMEM1Q8WWF3 244 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 RDH12Q96NR8 316 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 METTL8Q9H825 291 aaKnown RBP14.68□□□□□ -0.06
UPF3A-203ENST00000474056 MRPS18AQ9NVS2 196 aaKnown RBP14.68□□□□□ -0.06
UPF3A-203ENST00000474056 RPL36Q9Y3U8 105 aaKnown RBP14.68□□□□□ -0.06
UPF3A-203ENST00000474056 POMT1Q9Y6A1 747 aa14.68□□□□□ -0.06
UPF3A-203ENST00000474056 E9PI62 339 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 H0YAE9 185 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 CLIC3O95833 236 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 IGHV4-59P01825 116 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 TK1P04183 234 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 MDKP21741 143 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-203ENST00000474056 EEF1B2P24534 225 aaKnown RBP14.67□□□□□ -0.06
UPF3A-203ENST00000474056 IER3P46695 156 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 ATP1B3P54709 279 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 RPL31P62899 125 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms