RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CMTM4Q8IZR5 234 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 FGFRL1Q8N441 504 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 STX19Q8N4C7 294 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 DNAAF1Q8NEP3 725 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 OR51A4Q8NGJ6 313 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 OR10AC1Q8NH08 325 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 DACT3Q96B18 629 aaPredicted RBP11.77□□□□□ -0.52
VAMP4-203ENST00000474047 PDCD1LG2Q9BQ51 273 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 ZNF649Q9BS31 505 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 ZNF69Q9UC07 566 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 OR14J1Q9UGF5 321 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 ATRQ13535 2644 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 IGKV1D-17A0A075B6S4 117 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 A0A1W2PQ09 198 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 NOS1APO75052 506 aaPredicted RBP11.77□□□□□ -0.53
VAMP4-203ENST00000474047 ZFPL1O95159 310 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 SELLP14151 372 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 AMY2BP19961 511 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 MPZP25189 248 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 AZGP1P25311 298 aaKnown RBP11.77□□□□□ -0.53
VAMP4-203ENST00000474047 PRDX2P32119 198 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 POU3F4P49335 361 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 GTF2A1P52655 376 aaPredicted RBP11.77□□□□□ -0.53
VAMP4-203ENST00000474047 ST3GAL4Q11206 333 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 DGUOKQ16854 277 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 CCDC58Q4VC31 144 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 KLF17Q5JT82 389 aaPredicted RBP11.77□□□□□ -0.53
VAMP4-203ENST00000474047 OR2G6Q5TZ20 316 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 RPL22L1Q6P5R6 122 aaKnown RBP11.77□□□□□ -0.53
VAMP4-203ENST00000474047 LHFPL2Q6ZUX7 228 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 SLC25A26Q70HW3 274 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 MKXQ8IYA7 352 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 ZNRF1Q8ND25 227 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 BPIFB6Q8NFQ5 453 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 OR5D14Q8NGL3 314 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 GGHQ92820 318 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 SLAMF9Q96A28 289 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 CEP19Q96LK0 163 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 WDFY2Q96P53 400 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 NRIP2Q9BQI9 281 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 ZCCHC4Q9H5U6 513 aa11.77□□□□□ -0.53
VAMP4-203ENST00000474047 MXRA5Q9NR99 2828 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 TRIM77I1YAP6 450 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 VENTXO95231 258 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 IGHV4-38-2P0DP08 117 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 KRTAP24-1Q3LI83 254 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 FIP1L1Q6UN15 594 aaKnown RBP11.76□□□□□ -0.53
VAMP4-203ENST00000474047 USP43Q70EL4 1123 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 SERPINA12Q8IW75 414 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 OR13C9Q8NGT0 318 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 GATAD2BQ8WXI9 593 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 TFAP2CQ92754 450 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 SPSB1Q96BD6 273 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 OPALINQ96PE5 141 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 BABAM2Q9NXR7 383 aa11.76□□□□□ -0.53
VAMP4-203ENST00000474047 IGKV1-27A0A075B6S5 117 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 XPNPEP2O43895 674 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 FCN3O75636 299 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 SFTPBP07988 381 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 HCKP08631 526 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 CAV3P56539 151 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 PDCD1Q15116 288 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 AHSA2Q719I0 299 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 Q8IYB0 196 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 ZNF561Q8N587 486 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 SIGLECL1Q8N7X8 197 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 SDSLQ96GA7 329 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 DCTN5Q9BTE1 182 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 C19orf24Q9BVV8 132 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 CNOT2Q9NZN8 540 aaKnown RBP11.75□□□□□ -0.53
VAMP4-203ENST00000474047 CLEC2DQ9UHP7 191 aa11.75□□□□□ -0.53
VAMP4-203ENST00000474047 IGKV1-9A0A0C4DH69 117 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 H0YJX3 145 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 MAGEB3O15480 346 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 KNG1P01042 644 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 CD2P06729 351 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 PIPP12273 146 aaPredicted RBP11.74□□□□□ -0.53
VAMP4-203ENST00000474047 SOX2P48431 317 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 CEBPDP49716 269 aaPredicted RBP11.74□□□□□ -0.53
VAMP4-203ENST00000474047 AQP4P55087 323 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 HILS1P60008 231 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 BLMHQ13867 455 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 PHC2Q8IXK0 858 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 FAM185AQ8N0U4 392 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 BCL6BQ8N143 479 aaPredicted RBP11.74□□□□□ -0.53
VAMP4-203ENST00000474047 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 OR52N1Q8NH53 320 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 GPR148Q8TDV2 347 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 NRG4Q8WWG1 115 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 EMG1Q92979 244 aaKnown RBP11.74□□□□□ -0.53
VAMP4-203ENST00000474047 LHX4Q969G2 390 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 RFT1Q96AA3 541 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 PLCXD1Q9NUJ7 323 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 MTCH1Q9NZJ7 389 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 ZNF222Q9UK12 451 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 MAB21L2Q9Y586 359 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 KPTNQ9Y664 436 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 MYL12BO14950 172 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 BPIFB3P59826 476 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 CDK5R1Q15078 307 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms