RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 RNASE10Q5GAN6 216 aaKnown RBP15.42■□□□□ 0.06
VARS2-206ENST00000473916 FBXW12Q6X9E4 464 aa15.42■□□□□ 0.06
VARS2-206ENST00000473916 GLDNQ6ZMI3 551 aaPredicted RBP15.42■□□□□ 0.06
VARS2-206ENST00000473916 BEND4Q6ZU67 534 aa15.42■□□□□ 0.06
VARS2-206ENST00000473916 OSR2Q8N2R0 312 aa15.42■□□□□ 0.06
VARS2-206ENST00000473916 CAPSLQ8WWF8 208 aa15.42■□□□□ 0.06
VARS2-206ENST00000473916 SLX1AQ9BQ83 275 aa15.42■□□□□ 0.06
VARS2-206ENST00000473916 FAAP24Q9BTP7 215 aa15.42■□□□□ 0.06
VARS2-206ENST00000473916 ST6GALNAC5Q9BVH7 336 aa15.42■□□□□ 0.06
VARS2-206ENST00000473916 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.42■□□□□ 0.06
VARS2-206ENST00000473916 PLEKHJ1Q9NW61 149 aa15.42■□□□□ 0.06
VARS2-206ENST00000473916 ZNF107Q9UII5 783 aaPredicted RBP15.42■□□□□ 0.06
VARS2-206ENST00000473916 IGHV1-18A0A0C4DH31 117 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 OR5H1A6NKK0 313 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 ZNF35P13682 527 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 HOXB1P14653 301 aaPredicted RBP15.41■□□□□ 0.06
VARS2-206ENST00000473916 MRPL49Q13405 166 aaKnown RBP15.41■□□□□ 0.06
VARS2-206ENST00000473916 FAM189A2Q15884 450 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 C17orf107Q6ZR85 190 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 SLC36A1Q7Z2H8 476 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 SULT4A1Q9BR01 284 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 IL36GQ9NZH8 169 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 ST3GAL6Q9Y274 331 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 PIEZO1Q92508 2521 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 IGKV1D-8A0A087WSZ0 117 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 IGHV3-64DA0A0J9YX35 117 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 SSNA1O43805 119 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 CRHP06850 196 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 BMP5P22003 454 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 CALCRP30988 508 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 KCNJ8Q15842 424 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 GFRALQ6UXV0 394 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 FTMTQ8N4E7 242 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 OR10AD1Q8NGE0 317 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 OR4K15Q8NH41 348 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 S100PBPQ96BU1 408 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 ZNF488Q96MN9 340 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 OCSTAMPQ9BR26 566 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 MTCH1Q9NZJ7 389 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 FZR1Q9UM11 496 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 SLC25A15Q9Y619 301 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 ATRXP46100 2492 aa15.41■□□□□ 0.06
VARS2-206ENST00000473916 ZNF780AO75290 641 aaPredicted RBP15.4■□□□□ 0.06
VARS2-206ENST00000473916 IGLV1-44P01699 117 aa15.4■□□□□ 0.06
VARS2-206ENST00000473916 CHATP28329 748 aa15.4■□□□□ 0.06
VARS2-206ENST00000473916 MECP2P51608 486 aaKnown RBP15.4■□□□□ 0.06
VARS2-206ENST00000473916 RBM11P57052 281 aaKnown RBP15.4■□□□□ 0.06
VARS2-206ENST00000473916 UBE2MP61081 183 aaKnown RBP15.4■□□□□ 0.06
VARS2-206ENST00000473916 PSG7Q13046 419 aa15.4■□□□□ 0.06
VARS2-206ENST00000473916 CD276Q5ZPR3 534 aa15.4■□□□□ 0.06
VARS2-206ENST00000473916 HAGHLQ6PII5 290 aaPredicted RBP15.4■□□□□ 0.06
VARS2-206ENST00000473916 OR5A2Q8NGI9 324 aa15.4■□□□□ 0.06
VARS2-206ENST00000473916 EMG1Q92979 244 aaKnown RBP15.4■□□□□ 0.06
VARS2-206ENST00000473916 ZNF69Q9UC07 566 aa15.4■□□□□ 0.06
VARS2-206ENST00000473916 ZNF222Q9UK12 451 aa15.4■□□□□ 0.06
VARS2-206ENST00000473916 OR2AT4A6NND4 320 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 NAT1P18440 290 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 TMED4Q7Z7H5 227 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 WDR86Q86TI4 376 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 TCTE3Q8IZS6 198 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 C17orf78Q8N4C9 275 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 ZNF701Q9NV72 531 aaPredicted RBP15.39■□□□□ 0.05
VARS2-206ENST00000473916 AK3Q9UIJ7 227 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 VSIG4Q9Y279 399 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 A0A0G2JNJ9 132 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 SERPINE3A8MV23 424 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 C1QTNF9BB2RNN3 333 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 PRRG2O14669 202 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 PRAF2O60831 178 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 C1QTNF9P0C862 333 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 SULT1A3P0DMM9 295 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 SULT1A4P0DMN0 295 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 MEF2DQ14814 521 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 ATPAF1Q5TC12 328 aaPredicted RBP15.39■□□□□ 0.05
VARS2-206ENST00000473916 METTL11BQ5VVY1 283 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 C22orf34Q6ZV56 151 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 KLF14Q8TD94 323 aaPredicted RBP15.39■□□□□ 0.05
VARS2-206ENST00000473916 MARS2Q96GW9 593 aaKnown RBP15.39■□□□□ 0.05
VARS2-206ENST00000473916 HIST1H2AAQ96QV6 131 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 SFXN3Q9BWM7 321 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 FN3KRPQ9HA64 309 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 ING3Q9NXR8 418 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 Q9UFV3 132 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 MPC1Q9Y5U8 109 aa15.39■□□□□ 0.05
VARS2-206ENST00000473916 IGHV2OR16-5A0A0B4J2B6 119 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 FAM221AA4D161 298 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 DISC1C4P0D8 188 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 EEF1E1-BLOC1S5C9J1V9 151 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 H0YL77 283 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 J3QW42 95 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 RHBDL1O75783 438 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 SELEP16581 610 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 ZNF83P51522 516 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 ZNF626Q68DY1 528 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 HOGA1Q86XE5 327 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 ZSCAN4Q8NAM6 433 aaPredicted RBP15.38■□□□□ 0.05
VARS2-206ENST00000473916 SCP2D1Q9UJQ7 156 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 BOLA1Q9Y3E2 137 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 SPTA1P02549 2419 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 TMEM82A0PJX8 343 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms