RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 ST3GAL6Q9Y274 331 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 POLEQ07864 2286 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 DIDO1Q9BTC0 2240 aaKnown RBP5.34□□□□□ -1.55
CLK1-210ENST00000473565 SHANK1Q9Y566 2161 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 PQLC2LA1A4F0 135 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 UBE2QL1A1L167 161 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 EEF1E1-BLOC1S5C9J1V9 151 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 HSPB6O14558 160 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 IL2RAP01589 272 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 TDGF1P3P51864 188 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 RBMS2Q15434 407 aaKnown RBP5.34□□□□□ -1.56
CLK1-210ENST00000473565 C2orf68Q2NKX9 166 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 ZNF324BQ6AW86 544 aaPredicted RBP5.34□□□□□ -1.56
CLK1-210ENST00000473565 RPUSD3Q6P087 351 aaKnown RBP5.34□□□□□ -1.56
CLK1-210ENST00000473565 STEAP2Q8NFT2 490 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 OR4K15Q8NH41 348 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 FAM57AQ8TBR7 257 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 ST8SIA4Q92187 359 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 CA10Q9NS85 328 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 MTCH1Q9NZJ7 389 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 EIF3KQ9UBQ5 218 aaKnown RBP5.34□□□□□ -1.56
CLK1-210ENST00000473565 PKDREJQ9NTG1 2253 aa5.34□□□□□ -1.56
CLK1-210ENST00000473565 OR2AT4A6NND4 320 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 ANKRD30BLA7E2S9 258 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 C1QTNF9BB2RNN3 333 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 H0YL77 283 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 RHBDL1O75783 438 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 SIX6O95475 246 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 CD74P04233 296 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 GSTP1P09211 210 aaKnown RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 C1QTNF9P0C862 333 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 TRAPPC2P0DI81 140 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 TRAPPC2BP0DI82 140 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 GLI4P10075 376 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 PI3P19957 117 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 FABP6P51161 128 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 ZNF83P51522 516 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 FAM27E3Q08E93 113 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 CEACAM21Q3KPI0 293 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 GFRALQ6UXV0 394 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 BHLHA15Q7RTS1 189 aaPredicted RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 DOLPP1Q86YN1 238 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 OSR2Q8N2R0 312 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 OR10AD1Q8NGE0 317 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 S100PBPQ96BU1 408 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 TM2D1Q9BX74 207 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 FN3KRPQ9HA64 309 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 GHRLQ9UBU3 117 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 AK3Q9UIJ7 227 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 VSIG4Q9Y279 399 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 IGHV1-18A0A0C4DH31 117 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 FABP7O15540 132 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 OR7C1O76099 320 aaPredicted RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 AMY2BP19961 511 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 CALCRP30988 508 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 UCP2P55851 309 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 SNRPD2P62316 118 aaKnown RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 MRPS15P82914 257 aaKnown RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 SSBP1Q04837 148 aaKnown RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 PSG7Q13046 419 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 BAMBIQ13145 260 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 Q5BKY6 102 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 ATPAF1Q5TC12 328 aaPredicted RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 GLDNQ6ZMI3 551 aaPredicted RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 SLC36A1Q7Z2H8 476 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 WDR86Q86TI4 376 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 CDH24Q86UP0 819 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 PIAS4Q8N2W9 510 aaPredicted RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 NPDC1Q9NQX5 325 aaPredicted RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 ING3Q9NXR8 418 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 A0A1B0GUH1 482 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 TMEM82A0PJX8 343 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 SCGNO76038 276 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 CST4P01036 141 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 IGKV3-15P01624 115 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 CBR1P16152 277 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 TMPRSS3P57727 454 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 C4orf46Q504U0 113 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 KIAA2026Q5HYC2 2103 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 Q6ZPA2 131 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 DPPA2Q7Z7J5 298 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 MUC20Q8N307 709 aaPredicted RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 CSNK2A3Q8NEV1 391 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 OR5L1Q8NGL2 311 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 OR5P3Q8WZ94 311 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 EMG1Q92979 244 aaKnown RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 ZNF486Q96H40 463 aaPredicted RBP5.33□□□□□ -1.56
CLK1-210ENST00000473565 HIST1H2AAQ96QV6 131 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 ACTR6Q9GZN1 396 aa5.33□□□□□ -1.56
CLK1-210ENST00000473565 CHD3Q12873 2000 aaKnown RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 A0A0G2JNJ9 132 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 OR5H1A6NKK0 313 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 M0R1B8 84 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 SULT1A3P0DMM9 295 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 SULT1A4P0DMN0 295 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 CHATP28329 748 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 NPY4RP50391 375 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 RBM11P57052 281 aaKnown RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 MAB21L1Q13394 359 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 MSMPQ1L6U9 139 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms