RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 C17orf50Q8WW18 174 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 H2AFY2Q9P0M6 372 aaPredicted RBP10.98□□□□□ -0.65
CHD3-209ENST00000473376 IKZF2Q9UKS7 526 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 A0A1B0GTI1 187 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 ODF3BA8MYP8 253 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 XPNPEP2O43895 674 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 DLX6P56179 175 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 CXCR4P61073 352 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 BCL2L15Q5TBC7 163 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 SAMD5Q5TGI4 173 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 ZNF626Q68DY1 528 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 GID4Q8IVV7 300 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 Q8IYB0 196 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 HS3ST5Q8IZT8 346 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 RPS4Y2Q8TD47 263 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 UTP4Q969X6 686 aaKnown RBP10.97□□□□□ -0.65
CHD3-209ENST00000473376 ELL3Q9HB65 397 aaPredicted RBP10.97□□□□□ -0.65
CHD3-209ENST00000473376 ADGRL4Q9HBW9 690 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 OR52A1Q9UKL2 312 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 COPS3Q9UNS2 423 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 TCF19Q9Y242 345 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 ZNF281Q9Y2X9 895 aa10.97□□□□□ -0.65
CHD3-209ENST00000473376 PRR32B1ATL7 298 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 ZNF670-ZNF695F2Z2N8 137 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 GYG2O15488 501 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 SYNGR1O43759 233 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 ZNF737O75373 536 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 SULT1C4O75897 302 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 TFF1P04155 84 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 ZNF728P0DKX0 622 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 DAPP51397 102 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 PRB3Q04118 309 aaPredicted RBP10.96□□□□□ -0.65
CHD3-209ENST00000473376 MFGE8Q08431 387 aaPredicted RBP10.96□□□□□ -0.65
CHD3-209ENST00000473376 TMED1Q13445 227 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 MINOS1Q5TGZ0 78 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 SLX4IPQ5VYV7 408 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 ZBTB49Q6ZSB9 765 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 SPATA24Q86W54 205 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 SLC35F2Q8IXU6 374 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 ENTHD1Q8IYW4 607 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 KLHDC1Q8N7A1 406 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 OR4S1Q8NGB4 309 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 TMEM163Q8TC26 289 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 WIPF2Q8TF74 440 aaPredicted RBP10.96□□□□□ -0.65
CHD3-209ENST00000473376 WARS2Q9UGM6 360 aaKnown RBP10.96□□□□□ -0.65
CHD3-209ENST00000473376 SLC7A11Q9UPY5 501 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 SLC22A13Q9Y226 551 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 POMPQ9Y244 141 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 MINOS1-NBL1R4GNA1 71 aa10.96□□□□□ -0.65
CHD3-209ENST00000473376 TET2Q6N021 2002 aaPredicted RBP10.96□□□□□ -0.66
CHD3-209ENST00000473376 CMYA5Q8N3K9 4069 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 MEGF11A6BM72 1044 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 ZAR1LA6NP61 321 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 PSMD9O00233 223 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 PRKYO43930 277 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 GATBO75879 557 aaKnown RBP10.95□□□□□ -0.66
CHD3-209ENST00000473376 SERPINA3P01011 423 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 ALDOBP05062 364 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 MRPL3P09001 348 aaKnown RBP10.95□□□□□ -0.66
CHD3-209ENST00000473376 OR2T7P0C7T2 308 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 AZGP1P25311 298 aaKnown RBP10.95□□□□□ -0.66
CHD3-209ENST00000473376 FUT6P51993 359 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 CNN3Q15417 329 aaKnown RBP10.95□□□□□ -0.66
CHD3-209ENST00000473376 C12orf73Q69YU5 71 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 ASRGL1Q7L266 308 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 NDUFA11Q86Y39 141 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 OR8H2Q8N162 312 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 DNAAF1Q8NEP3 725 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 RORBQ92753 470 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 SNX22Q96L94 193 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 PRSS22Q9GZN4 317 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 ABCB10Q9NRK6 738 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 SERTAD4Q9NUC0 356 aa10.95□□□□□ -0.66
CHD3-209ENST00000473376 MRM2Q9UI43 246 aaKnown RBP10.95□□□□□ -0.66
CHD3-209ENST00000473376 hADV38S2A0JD32 116 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 A6NDX4 124 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 CHST1O43916 411 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 DNAJC8O75937 253 aaPredicted RBP10.94□□□□□ -0.66
CHD3-209ENST00000473376 KRT8P05787 483 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 IGHV1-8P0DP01 117 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 CCL3L1P16619 93 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 ERP29P30040 261 aaKnown RBP10.94□□□□□ -0.66
CHD3-209ENST00000473376 ZNF273Q14593 569 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 LY6EQ16553 131 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 KDM4DQ6B0I6 523 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 GDPD3Q7L5L3 318 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 C16orf82Q7Z2V1 217 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 OR4F17Q8NGA8 305 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 PP6455Q8WZ26 134 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 CEP19Q96LK0 163 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 APOL4Q9BPW4 351 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 OSBPL10Q9BXB5 764 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 CHST5Q9GZS9 411 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 WNT10AQ9GZT5 417 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 ZNF702PQ9H963 129 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 RHOFQ9HBH0 211 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 GPR173Q9NS66 373 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 KRT84Q9NSB2 600 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms