RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 PRR7Q8TB68 274 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 TMEM171Q8WVE6 324 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 AQP3Q92482 292 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 RAB3CQ96E17 227 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 ZC3HAV1LQ96H79 300 aaKnown RBP10.95□□□□□ -0.66
VPS13D-205ENST00000473099 GAL3ST1Q99999 423 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 SELENOIQ9C0D9 397 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 OR51I2Q9H344 312 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 BANF2Q9H503 90 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 CRIM1Q9NZV1 1036 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 MTFP1Q9UDX5 166 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 TBC1D24Q9ULP9 559 aa10.95□□□□□ -0.66
VPS13D-205ENST00000473099 ANKHD1Q8IWZ3 2542 aaKnown RBP10.95□□□□□ -0.66
VPS13D-205ENST00000473099 FLNBO75369 2602 aaKnown RBP10.94□□□□□ -0.66
VPS13D-205ENST00000473099 PLSCR5A0PG75 271 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 NAP1L6A6NFF2 107 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 DPRXA6NFQ7 191 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 ABCD4O14678 606 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 LYRM1O43325 122 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 ANGPTL7O43827 346 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 LILRA1O75019 489 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 PLATP00750 562 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 ACAA1P09110 424 aaPredicted RBP10.94□□□□□ -0.66
VPS13D-205ENST00000473099 CSF1P09603 554 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 CD3GP09693 182 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 HIST1H1DP16402 221 aaKnown RBP10.94□□□□□ -0.66
VPS13D-205ENST00000473099 FAUP35544 74 aaKnown RBP10.94□□□□□ -0.66
VPS13D-205ENST00000473099 TLE1Q04724 770 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 BSPH1Q075Z2 132 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 ZNF260Q3ZCT1 412 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 NCMAPQ5T1S8 102 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 SLC22A25Q6T423 547 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 Q6ZNX1 250 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 Q6ZTK2 550 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 C22orf34Q6ZV56 151 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 OR10K1Q8NGX5 313 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 GPX8Q8TED1 209 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 FGF23Q9GZV9 251 aaPredicted RBP10.94□□□□□ -0.66
VPS13D-205ENST00000473099 HSF4Q9ULV5 492 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 UBR5O95071 2799 aaPredicted RBP10.94□□□□□ -0.66
VPS13D-205ENST00000473099 DYSFO75923 2080 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 TANC2Q9HCD6 1990 aa10.94□□□□□ -0.66
VPS13D-205ENST00000473099 ARFGEF3Q5TH69 2177 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 IGKV1-12A0A0C4DH73 117 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 A0A1W2PP11 408 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 NKX2-6A6NCS4 301 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 SERPINE3A8MV23 424 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 ORC5O43913 435 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 CLDN14O95500 239 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 IGKV1D-12P01611 117 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 GNLYP22749 145 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 BLVRBP30043 206 aaPredicted RBP10.93□□□□□ -0.66
VPS13D-205ENST00000473099 PMELP40967 661 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 CBX5P45973 191 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 RBM11P57052 281 aaKnown RBP10.93□□□□□ -0.66
VPS13D-205ENST00000473099 FGF12P61328 243 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 MPV17LQ2QL34 196 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 ALKBH6Q3KRA9 238 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 MOGAT2Q3SYC2 334 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 CDNFQ49AH0 187 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 BEX5Q5H9J7 111 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 HAGHLQ6PII5 290 aaPredicted RBP10.93□□□□□ -0.66
VPS13D-205ENST00000473099 CELF2-AS1Q8N7Q2 184 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 ENKURQ8TC29 256 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 MRPL24Q96A35 216 aaKnown RBP10.93□□□□□ -0.66
VPS13D-205ENST00000473099 NICN1Q9BSH3 213 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 CA10Q9NS85 328 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 RBFOX1Q9NWB1 397 aaKnown RBP10.93□□□□□ -0.66
VPS13D-205ENST00000473099 COPZ2Q9P299 210 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 DUSP13Q9UII6 198 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 CACNG2Q9Y698 323 aa10.93□□□□□ -0.66
VPS13D-205ENST00000473099 MYO18BQ8IUG5 2567 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 A0A0A6YYD4 124 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 ANKRD20A5PA0PJZ0 165 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 TUBAL3A6NHL2 446 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 FOXI3A8MTJ6 420 aaPredicted RBP10.92□□□□□ -0.66
VPS13D-205ENST00000473099 MFNGO00587 321 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 PLA2G10O15496 165 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 SOCS1O15524 211 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 MLNRO43193 412 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 LANCL1O43813 399 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 CD3EP07766 207 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 RCVRNP35243 200 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 CD200P41217 278 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 GNG2P59768 71 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 KLF9Q13886 244 aaPredicted RBP10.92□□□□□ -0.66
VPS13D-205ENST00000473099 IL13RA2Q14627 380 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 RNASE12Q5GAN4 147 aaKnown RBP10.92□□□□□ -0.66
VPS13D-205ENST00000473099 FIP1L1Q6UN15 594 aaKnown RBP10.92□□□□□ -0.66
VPS13D-205ENST00000473099 DVL3Q92997 716 aaPredicted RBP10.92□□□□□ -0.66
VPS13D-205ENST00000473099 SEH1LQ96EE3 360 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 NEDD4LQ96PU5 975 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 DIRC2Q96SL1 478 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 C11orf54Q9H0W9 315 aaPredicted RBP10.92□□□□□ -0.66
VPS13D-205ENST00000473099 TLNRD1Q9H1K6 362 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 POU2F3Q9UKI9 436 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 ZDHHC8Q9ULC8 765 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 ST3GAL6Q9Y274 331 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 ATP23Q9Y6H3 246 aa10.92□□□□□ -0.66
VPS13D-205ENST00000473099 CACNA1DQ01668 2161 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms