RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 OR5AK2Q8NH90 309 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 H1FXQ92522 213 aaKnown RBP7.56□□□□□ -1.2
SYN3-211ENST00000472027 GGHQ92820 318 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 SDSLQ96GA7 329 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 TMEM80Q96HE8 168 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 JMJD8Q96S16 334 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 TBX15Q96SF7 602 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 NRIP2Q9BQI9 281 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 DCTN5Q9BTE1 182 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 HES4Q9HCC6 221 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 MTCH1Q9NZJ7 389 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 SLC25A10Q9UBX3 287 aaPredicted RBP7.56□□□□□ -1.2
SYN3-211ENST00000472027 DIMT1Q9UNQ2 313 aaKnown RBP7.56□□□□□ -1.2
SYN3-211ENST00000472027 CAB39Q9Y376 341 aaPredicted RBP7.56□□□□□ -1.2
SYN3-211ENST00000472027 SOX21Q9Y651 276 aaPredicted RBP7.56□□□□□ -1.2
SYN3-211ENST00000472027 CENPVL3A0A0U1RRI6 287 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 TMEM212A6NML5 194 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 INMTO95050 263 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 RPSAP08865 295 aaKnown RBP7.55□□□□□ -1.2
SYN3-211ENST00000472027 CCDC159P0C7I6 412 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 NDUFB7P17568 137 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 PRKACBP22694 351 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 AZGP1P25311 298 aaKnown RBP7.55□□□□□ -1.2
SYN3-211ENST00000472027 CEBPDP49716 269 aaPredicted RBP7.55□□□□□ -1.2
SYN3-211ENST00000472027 MTCP1P56278 107 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 CAV3P56539 151 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 BPIFB3P59826 476 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 PDCD1Q15116 288 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 SMIM21Q3B7S5 101 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 OR2G6Q5TZ20 316 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 GPR157Q5UAW9 335 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 LAIR2Q6ISS4 152 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 RBMS3Q6XE24 437 aaKnown RBP7.55□□□□□ -1.2
SYN3-211ENST00000472027 BRD3OSQ6XYD6 125 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 TMPRSS11AQ6ZMR5 421 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 C9orf139Q6ZV77 190 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 SLC25A26Q70HW3 274 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 SERPINA12Q8IW75 414 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 CD177Q8N6Q3 437 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 ZDHHC22Q8N966 263 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 C8orf46Q8TAG6 207 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 HAVCR2Q8TDQ0 301 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 ZFAND2BQ8WV99 257 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 GATAD2BQ8WXI9 593 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 TFAP2CQ92754 450 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 SLAMF9Q96A28 289 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 DMRTB1Q96MA1 342 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 ZNF48Q96MX3 618 aaPredicted RBP7.55□□□□□ -1.2
SYN3-211ENST00000472027 PDCD1LG2Q9BQ51 273 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 COMMD4Q9H0A8 199 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 SIRPDQ9H106 197 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 VCXQ9H320 206 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 ZCCHC4Q9H5U6 513 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 ESM1Q9NQ30 184 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 CHCHD3Q9NX63 227 aaKnown RBP7.55□□□□□ -1.2
SYN3-211ENST00000472027 BABAM2Q9NXR7 383 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 CLEC2DQ9UHP7 191 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 EXOSC1Q9Y3B2 195 aaKnown RBP7.55□□□□□ -1.2
SYN3-211ENST00000472027 KPTNQ9Y664 436 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 NAV3Q8IVL0 2385 aa7.55□□□□□ -1.2
SYN3-211ENST00000472027 F8VVB4 439 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 F8VWA3 439 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 TRIM77I1YAP6 450 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 OGG1O15527 345 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 XPNPEP2O43895 674 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 KNG1P01042 644 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 MT-ND2P03891 347 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 OCM2P0CE71 109 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 OCMP0CE72 109 aaPredicted RBP7.54□□□□□ -1.2
SYN3-211ENST00000472027 MYL12AP19105 171 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 CAPZA1P52907 286 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 ST3GAL4Q11206 333 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 MED21Q13503 144 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 CCDC58Q4VC31 144 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 XAF1Q6GPH4 301 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 RPL22L1Q6P5R6 122 aaKnown RBP7.54□□□□□ -1.2
SYN3-211ENST00000472027 LHFPL2Q6ZUX7 228 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 VMO1Q7Z5L0 202 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 MKXQ8IYA7 352 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 ZNF561Q8N587 486 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.54□□□□□ -1.2
SYN3-211ENST00000472027 TMEM185AQ8NFB2 350 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 BPIFB6Q8NFQ5 453 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 FBLIM1Q8WUP2 373 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 NRG4Q8WWG1 115 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 LHX4Q969G2 390 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 SPSB1Q96BD6 273 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 CEP19Q96LK0 163 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 OPALINQ96PE5 141 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 ELL3Q9HB65 397 aaPredicted RBP7.54□□□□□ -1.2
SYN3-211ENST00000472027 PLCXD1Q9NUJ7 323 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 ONECUT1Q9UBC0 465 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 OR14J1Q9UGF5 321 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 DHDHQ9UQ10 334 aa7.54□□□□□ -1.2
SYN3-211ENST00000472027 SIRT4Q9Y6E7 314 aaPredicted RBP7.54□□□□□ -1.2
SYN3-211ENST00000472027 FBN1P35555 2871 aaKnown RBP7.54□□□□□ -1.2
SYN3-211ENST00000472027 IGHV1-69DA0A0B4J2H0 117 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 MDFIC2A0A1B0GVS7 189 aa7.53□□□□□ -1.2
SYN3-211ENST00000472027 A0A1W2PQ09 198 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms