RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ZNF77Q15935 545 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 HES3Q5TGS1 186 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FNDC7Q5VTL7 733 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RHOXF1Q8NHV9 184 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TAAR9Q96RI9 348 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 R3HDMLQ9H3Y0 253 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SLC7A10Q9NS82 523 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MED19A0JLT2 244 aaPredicted RBP11.9□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 H0YIG0 161 aa11.9□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 NCR3LG1Q68D85 454 aa11.9□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR2V1Q8NHB1 315 aa11.9□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FBXL4Q9UKA2 621 aa11.9□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LSM2Q9Y333 95 aaKnown RBP11.9□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TRAV17A0A0B4J275 112 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 F2RL2O00254 374 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PPOXP50336 477 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RAB9AP51151 201 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TMEM52BQ4KMG9 183 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PAQR6Q6TCH4 344 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MORN4Q8NDC4 146 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RASL11BQ9BPW5 248 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 GHITMQ9H3K2 345 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PSG11Q9UQ72 335 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TUBAL3A6NHL2 446 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TTRP02766 147 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MGMTP16455 207 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 C9orf50Q5SZB4 431 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LYSMD2Q8IV50 215 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SLC26A1Q9H2B4 701 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MYOZ1Q9NP98 299 aaPredicted RBP11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TMEM140Q9NV12 185 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RECKO95980 971 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SSX1Q16384 188 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ACSM5Q6NUN0 579 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR4S1Q8NGB4 309 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PCED1AQ9H1Q7 454 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SCN11AQ9UI33 1791 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FCMRO60667 390 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 DNAL4O96015 105 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ACP1P24666 158 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FOXF1Q12946 379 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TRIP6Q15654 476 aaKnown RBP11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TMEM56Q96MV1 263 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 K7ERU9 68 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR4E1P0C645 316 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RPS19P39019 145 aaKnown RBP11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CAMPP49913 170 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FFAR4Q5NUL3 377 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OIT3Q8WWZ8 545 aa11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MS4A7Q9GZW8 240 aaPredicted RBP11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 AMMECR1Q9Y4X0 333 aaPredicted RBP11.89□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TNFRSF10CO14798 259 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ARRB2P32121 409 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 KIR3DL2P43630 455 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 DGCR2P98153 550 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ELFN2Q5R3F8 820 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 C16orf47Q6ZP98 133 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 C5orf17Q8NAS9 161 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR52N4Q8NGI2 321 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CIB3Q96Q77 187 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ISG20L2Q9H9L3 353 aaKnown RBP11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 NME1P15531 152 aaKnown RBP11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 DIO1P49895 249 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FAM109BQ6ICB4 259 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SSC4DQ8WTU2 575 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MYOM1P52179 1685 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPC4 97 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR4C46A6NHA9 309 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ZBTB42B2RXF5 422 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ACSM4P0C7M7 580 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CCR9P51686 369 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PRRX1P54821 245 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 NDUFB11Q9NX14 153 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TMPRSS11DO60235 418 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 WNT1P04628 370 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CD226Q15762 336 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR2W3Q7Z3T1 314 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CALHM3Q86XJ0 350 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 BVESQ8NE79 360 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MYOZ3Q8TDC0 251 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 VAMP8Q9BV40 100 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CES1P1Q9UKY3 287 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 DIMT1Q9UNQ2 313 aaKnown RBP11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PRSS2P07478 247 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 DSCR4P56555 118 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR52N1Q8NH53 320 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RBPMSQ93062 196 aaKnown RBP11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 GNPNAT1Q96EK6 184 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 GON7Q9BXV9 100 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SLCO1C1Q9NYB5 712 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 EMP1P54849 157 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ZNF841Q6ZN19 808 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR52B4Q8NGK2 314 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LAMP3Q9UQV4 416 aa11.88□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 HTR1DP28221 377 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CAPZBP47756 277 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 KCNMB1Q16558 191 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms