RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TMEM272A0A1B0GTI8 110 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 HTR3BO95264 441 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 PGA5P0DJD9 388 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 SERPINA2P20848 420 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 EFNB2P52799 333 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 UNC119Q13432 240 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 RSU1Q15404 277 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 SAXO1Q8IYX7 474 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 C19orf18Q8NEA5 215 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 CCL17Q92583 94 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 CEP19Q96LK0 163 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 WDR13Q9H1Z4 485 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 POLDIP2Q9Y2S7 368 aa16.17■□□□□ 0.18
PSPC1-203ENST00000471658 TRAPPC2LH3BP13 241 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 CTDSP2O14595 271 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 KDM4BO94953 1096 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 ZNF205O95201 554 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 BPNT1O95861 308 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 CYB5AP00167 134 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 ZNF404Q494X3 552 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 GCSAMQ8N6F7 178 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 POC1AQ8NBT0 407 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 MCFD2Q8NI22 146 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 Q8TCH9 128 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 NEU4Q8WWR8 484 aaPredicted RBP16.16■□□□□ 0.18
PSPC1-203ENST00000471658 ERGIC1Q969X5 290 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 GAL3ST1Q99999 423 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 NRIP2Q9BQI9 281 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 NXF2Q9GZY0 626 aaKnown RBP16.16■□□□□ 0.18
PSPC1-203ENST00000471658 ABRACLQ9P1F3 81 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 IL36RNQ9UBH0 155 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 TMEM14DPA8MWL7 114 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 LDLRAD4O15165 306 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 CRTAPO75718 401 aaPredicted RBP16.16■□□□□ 0.18
PSPC1-203ENST00000471658 BMXP51813 675 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 SNU13P55769 128 aaKnown RBP16.16■□□□□ 0.18
PSPC1-203ENST00000471658 ERVK11-1P61568 191 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 BIVMQ86UB2 503 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 RNF7Q9UBF6 113 aa16.16■□□□□ 0.18
PSPC1-203ENST00000471658 DYSFO75923 2080 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 NOS1APO75052 506 aaPredicted RBP16.15■□□□□ 0.18
PSPC1-203ENST00000471658 MPIG6BO95866 241 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 LHBP01229 141 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 UBBP0CG47 229 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 DAOP14920 347 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 CD80P33681 288 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 CFHR2P36980 270 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 OR10Z1Q8NGY1 313 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 AP3S1Q92572 193 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 KCTD12Q96CX2 325 aaKnown RBP16.15■□□□□ 0.18
PSPC1-203ENST00000471658 C6orf62Q9GZU0 229 aaPredicted RBP16.15■□□□□ 0.18
PSPC1-203ENST00000471658 CXorf56Q9H5V9 222 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 TMEM106BQ9NUM4 274 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 IL36GQ9NZH8 169 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 GHRLQ9UBU3 117 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 SPATA2Q9UM82 520 aa16.15■□□□□ 0.18
PSPC1-203ENST00000471658 SPG11Q96JI7 2443 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.14■□□□□ 0.17
PSPC1-203ENST00000471658 HPGDSO60760 199 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 F12P00748 615 aaPredicted RBP16.14■□□□□ 0.17
PSPC1-203ENST00000471658 IGHV4-39P01824 125 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 EFNA4P52798 201 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 PDCD1Q15116 288 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 SFRP4Q6FHJ7 346 aaPredicted RBP16.14■□□□□ 0.17
PSPC1-203ENST00000471658 OR11L1Q8NGX0 322 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 ACOT12Q8WYK0 555 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 RDH5Q92781 318 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 SLC25A38Q96DW6 304 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 CYYR1Q96J86 154 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 MIXL1Q9H2W2 232 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 ZNF581Q9P0T4 197 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 HECTD1Q9ULT8 2610 aa16.14■□□□□ 0.17
PSPC1-203ENST00000471658 A0A075B6Q4 140 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 IGHV3OR15-7A0A075B7D8 119 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 SRRM5B3KS81 715 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 TMEM178BH3BS89 294 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 RP2O75695 350 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 NXPH2O95156 264 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 CSTBP04080 98 aaKnown RBP16.13■□□□□ 0.17
PSPC1-203ENST00000471658 TFF1P04155 84 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 ACAA1P09110 424 aaPredicted RBP16.13■□□□□ 0.17
PSPC1-203ENST00000471658 MGMTP16455 207 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 PRKACAP17612 351 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 GLRA1P23415 457 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 DUSP1P28562 367 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 PIGYQ3MUY2 71 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 FAM58AQ8N1B3 248 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 OSR2Q8N2R0 312 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 SAMD12Q8N8I0 201 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 DTX3Q8N9I9 347 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 Q8NFD4 153 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 KCNG3Q8TAE7 436 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 EMG1Q92979 244 aaKnown RBP16.13■□□□□ 0.17
PSPC1-203ENST00000471658 SELENOIQ9C0D9 397 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 HMG20AQ9NP66 347 aa16.13■□□□□ 0.17
PSPC1-203ENST00000471658 TMEM127O75204 238 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 IRF2P14316 349 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 HFEQ30201 348 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 ELP2Q6IA86 826 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 MZT2AQ6P582 158 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms