RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 OR6M1Q8NGM8 313 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 OR10Z1Q8NGY1 313 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 SLAMF9Q96A28 289 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 FAM3DQ96BQ1 224 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 MBD6Q96DN6 1003 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 BORCS8Q96FH0 119 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 Q96M66 194 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 DIRC2Q96SL1 478 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 RTL8AQ9BWD3 113 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 GSX2Q9BZM3 304 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 LIN7BQ9HAP6 207 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 PLEKHA1Q9HB21 404 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 SEBOXQ9HB31 216 aaPredicted RBP8.28□□□□□ -1.08
SF3A1-207ENST00000471342 HMG20AQ9NP66 347 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 C1orf123Q9NWV4 160 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 DAPK2Q9UIK4 370 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 MRPS28Q9Y2Q9 187 aaKnown RBP8.28□□□□□ -1.08
SF3A1-207ENST00000471342 SETXQ7Z333 2677 aaKnown RBP8.28□□□□□ -1.08
SF3A1-207ENST00000471342 SVEP1Q4LDE5 3571 aa8.27□□□□□ -1.08
SF3A1-207ENST00000471342 CHD3Q12873 2000 aaKnown RBP8.27□□□□□ -1.09
SF3A1-207ENST00000471342 AKR7A2O43488 359 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 CYB5R3P00387 301 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-207ENST00000471342 IGHV2-70P01814 119 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 EIF4EP06730 217 aaKnown RBP8.27□□□□□ -1.09
SF3A1-207ENST00000471342 POU3F4P49335 361 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 BMXP51813 675 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 ATP1B3P54709 279 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 PPP3R1P63098 170 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 DYNC1I2Q13409 638 aaKnown RBP8.27□□□□□ -1.09
SF3A1-207ENST00000471342 TESK1Q15569 626 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 DGUOKQ16854 277 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 PCGF3Q3KNV8 242 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 PLAC9Q5JTB6 97 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 GLT8D1Q68CQ7 371 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 STUMQ69YW2 141 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF841Q6ZN19 808 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 ACP7Q6ZNF0 438 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 FAM90A1Q86YD7 464 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF573Q86YE8 665 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 CMTM4Q8IZR5 234 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 FGFRL1Q8N441 504 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 OR51F2Q8NH61 342 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 ANGPTL6Q8NI99 470 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 LGALS14Q8TCE9 139 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 TNFAIP8L1Q8WVP5 186 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 ERGIC1Q969X5 290 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 FOXRED1Q96CU9 486 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-207ENST00000471342 LURAP1Q96LR2 239 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 SDHCQ99643 169 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-207ENST00000471342 NICN1Q9BSH3 213 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 DCUN1D5Q9BTE7 237 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 SHARPINQ9H0F6 387 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 ABCG5Q9H222 651 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 BANF2Q9H503 90 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 TMEM165Q9HC07 324 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 TMEM106BQ9NUM4 274 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 RCC2Q9P258 522 aaKnown RBP8.27□□□□□ -1.09
SF3A1-207ENST00000471342 CTSZQ9UBR2 303 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 ELF5Q9UKW6 265 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-207ENST00000471342 SPATA2Q9UM82 520 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 PLEKHA6Q9Y2H5 1048 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 NOP16Q9Y3C1 178 aaKnown RBP8.27□□□□□ -1.09
SF3A1-207ENST00000471342 MAB21L2Q9Y586 359 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 A3GALT2U3KPV4 340 aa8.27□□□□□ -1.09
SF3A1-207ENST00000471342 DSCAMO60469 2012 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 TRAV24A0A0B4J272 114 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 IGHV1-69-2A0A0G2JMI3 117 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 PLSCR5A0PG75 271 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 TMEM82A0PJX8 343 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 ANXA2P2A6NMY6 339 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 PDCD5O14737 125 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 SOCS1O15524 211 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 PSPNO60542 156 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 CDC14BO60729 498 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF737O75373 536 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF205O95201 554 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 BPNT1O95861 308 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 PLATP00750 562 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 HLA-DQB1P01920 261 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 HCKP08631 526 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 PSG2P11465 335 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 ELK1P19419 428 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 MYL9P24844 172 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 LMO1P25800 156 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 GIFP27352 417 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 PTH2RP49190 550 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 RORCP51449 518 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 EFNA4P52798 201 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 SELENOVP59797 346 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 FGF12P61328 243 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 SNRPD2P62316 118 aaKnown RBP8.26□□□□□ -1.09
SF3A1-207ENST00000471342 RPS27AP62979 156 aaKnown RBP8.26□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF146Q15072 292 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 PDCD1Q15116 288 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 ZMYND11Q15326 602 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 RAB11BQ15907 218 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 PIGYQ3MUY2 71 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 ATPAF1Q5TC12 328 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-207ENST00000471342 LYPD2Q6UXB3 125 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 CCDC190Q86UF4 302 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms