RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 MS4A6EQ96DS6 147 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 IGSF21Q96ID5 467 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 BTF3L4Q96K17 158 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ZNF514Q96K75 400 aaPredicted RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 SPACA5Q96QH8 159 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ADOQ96SZ5 270 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 WWTR1Q9GZV5 400 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 CDH20Q9HBT6 801 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TMEM9BQ9NQ34 198 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 B9D1Q9UPM9 204 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 B3GALT5Q9Y2C3 310 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ENTPD2Q9Y5L3 495 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 B3GALT1Q9Y5Z6 326 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TMEM14AQ9Y6G1 99 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 A0A0A6YYD5 115 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TMEM238LA0A1B0GVL6 79 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 MEGF11A6BM72 1044 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ZNF840PA6NDX5 716 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 CEBPZOSA8MTT3 80 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 H7C4K7 107 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SERPINA7P05543 415 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 GABRA3P34903 492 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 THPOP40225 353 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SUCLG1P53597 346 aaKnown RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 MRPS34P82930 218 aaKnown RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 PLAURQ03405 335 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 PNRC1Q12796 327 aaPredicted RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 LMAN2Q12907 356 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 GNMTQ14749 295 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ARHGAP19Q14CB8 494 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ACOT6Q3I5F7 207 aaPredicted RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 LCN15Q6UWW0 184 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SULF2Q8IWU5 870 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TMEM256Q8N2U0 113 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 NKAIN3Q8N8D7 197 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ZNF596Q8TC21 504 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ASB5Q8WWX0 329 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ZCCHC14Q8WYQ9 949 aaKnown RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 APH1AQ96BI3 265 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 CLUHP3Q96NS8 147 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 RTBDNQ9BSG5 229 aaPredicted RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 ANGPTL4Q9BY76 406 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SAMD10Q9BYL1 202 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 VN1R1Q9GZP7 353 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 BANF2Q9H503 90 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ZNF430Q9H8G1 570 aaPredicted RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 SEPSECSQ9HD40 501 aaKnown RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 ZNF701Q9NV72 531 aaPredicted RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 P4HTMQ9NXG6 502 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 PPIL1Q9Y3C6 166 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 CLDN16Q9Y5I7 305 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 YLPM1P49750 1951 aaKnown RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 A0A1W2PN81 502 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 FAM24AA6NFZ4 105 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 NUDT21O43809 227 aaKnown RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 TNFSF13O75888 250 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ABHD16AO95870 558 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 RENP00797 406 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 TDGF1P13385 188 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 GRNP28799 593 aaKnown RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 HOXC8P31273 242 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 CHRNA7P36544 502 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 RND2P52198 227 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 RIPPLY3P57055 190 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 REEP5Q00765 189 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 RUNX1Q01196 453 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 MFGE8Q08431 387 aaPredicted RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 IL24Q13007 206 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ZNF266Q14584 549 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 CHRFAM7AQ494W8 412 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 TRMT12Q53H54 448 aaKnown RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 ALG10Q5BKT4 473 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ZNF684Q5T5D7 378 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 C1QL3Q5VWW1 255 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 SLC48A1Q6P1K1 146 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 C22orf39Q6P5X5 142 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 SPSB3Q6PJ21 355 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 COMMD2Q86X83 199 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 KMT5CQ86Y97 462 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 C12orf76Q8N812 135 aaPredicted RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 DTWD2Q8NBA8 298 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 RPUSD4Q96CM3 377 aaKnown RBP3.72□□□□□ -1.81
VPS50-210ENST00000471188 OR8B4Q96RC9 309 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 SMIM7Q9BQ49 75 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 NICN1Q9BSH3 213 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 CSTL1Q9H114 145 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 SLC2A9Q9NRM0 540 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 HHLA2Q9UM44 414 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 OR51B4Q9Y5P0 310 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 FREM3P0C091 2139 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 KIAA2026Q5HYC2 2103 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 A0A0B4J2E0 115 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 A0A1B0GX12 115 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 MAP1LC3B2A6NCE7 125 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 A8MVM7 634 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 C11orf98E9PRG8 122 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 ST8SIA3O43173 380 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 HCRTR2O43614 444 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 LMX1BO60663 402 aa3.72□□□□□ -1.81
VPS50-210ENST00000471188 CST7O76096 145 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms