RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 LINC01560Q8TB33 94 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 CCDC12Q8WUD4 166 aaPredicted RBP2.1□□□□□ -2.07
BRCA2-202ENST00000470094 C17orf50Q8WW18 174 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 ZFP3Q96NJ6 502 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 CDX2Q99626 313 aaPredicted RBP2.1□□□□□ -2.07
BRCA2-202ENST00000470094 LLPHQ9BRT6 129 aaKnown RBP2.1□□□□□ -2.07
BRCA2-202ENST00000470094 ZNF649Q9BS31 505 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 CHCHD7Q9BUK0 85 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 NLE1Q9NVX2 485 aaPredicted RBP2.1□□□□□ -2.07
BRCA2-202ENST00000470094 MS4A12Q9NXJ0 267 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 FADS3Q9Y5Q0 445 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 ZNF608Q9ULD9 1512 aaPredicted RBP2.1□□□□□ -2.07
BRCA2-202ENST00000470094 BRCA1P38398 1863 aaKnown RBP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 PTPRTO14522 1441 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 TNS2Q63HR2 1409 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 CDIPTO14735 213 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 TCAPO15273 167 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 CALUO43852 315 aaPredicted RBP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 PLIN3O60664 434 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 SHOX2O60902 331 aaPredicted RBP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 CCNKO75909 580 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 CCNE2O96020 404 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 CD74P04233 296 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 LINC00869P0C866 280 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 SLC35E2BP0CK96 405 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 GRB2P62993 217 aaKnown RBP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 ADIGQ0VDE8 80 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 PMVKQ15126 192 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 OR4D1Q15615 310 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 CEACAM16Q2WEN9 425 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 YIF1BQ5BJH7 314 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 KPRPQ5T749 579 aaPredicted RBP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 AP1ARQ63HQ0 302 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 ZFP1Q6P2D0 407 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 TMEM25Q86YD3 366 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 BBS7Q8IWZ6 715 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 OR5T1Q8NG75 326 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 OR4M2Q8NGB6 313 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 OR5P2Q8WZ92 322 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 RORBQ92753 470 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 CPNE4Q96A23 557 aaPredicted RBP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 L3HYPDHQ96EM0 354 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 MRPL48Q96GC5 212 aaKnown RBP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 SERPINB11Q96P15 392 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 CATSPER2Q96P56 530 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 VAT1Q99536 393 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 TBL1YQ9BQ87 522 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 MED10Q9BTT4 135 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 BBS2Q9BXC9 721 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 HDHD2Q9H0R4 259 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 TMBIM4Q9HC24 238 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 EXOSC4Q9NPD3 245 aaKnown RBP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 C12orf4Q9NQ89 552 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 EURLQ9NYK6 297 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 ANXA10Q9UJ72 324 aa2.09□□□□□ -2.07
BRCA2-202ENST00000470094 FARSAQ9Y285 508 aaKnown RBP2.09□□□□□ -2.07
BRCA2-202ENST00000470094 NPHP4O75161 1426 aaPredicted RBP2.08□□□□□ -2.08
BRCA2-202ENST00000470094 PLA2R1Q13018 1463 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 TRAV40A0A0B4J280 105 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 CENPVL3A0A0U1RRI6 287 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 A0A1B0GTI1 187 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 TMEM213A2RRL7 107 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 C7orf66A4D0T2 115 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 TRPC5OSA6NMA1 111 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 MKRN2OSH3BPM6 223 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 NDUFS6O75380 124 aaKnown RBP2.08□□□□□ -2.08
BRCA2-202ENST00000470094 GP1BAP07359 652 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 HLA-GP17693 338 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 IL3RAP26951 378 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 GTF2H1P32780 548 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 MAGEA3P43357 314 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 RAB38P57729 211 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 UBE2IP63279 158 aaKnown RBP2.08□□□□□ -2.08
BRCA2-202ENST00000470094 TPM4P67936 248 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 TPBGQ13641 420 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 BSXQ3C1V8 233 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 FBXL19-AS1Q494R0 122 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 COX19Q49B96 90 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 HBMQ6B0K9 141 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 ZNF880Q6PDB4 577 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 TRMT10CQ7L0Y3 403 aaKnown RBP2.08□□□□□ -2.08
BRCA2-202ENST00000470094 FAM9CQ8IZT9 166 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 LINC00337Q8N6G1 96 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 CCNYL1Q8N7R7 359 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 SLC25A29Q8N8R3 303 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 OR8G5Q8NG78 346 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 OR9A2Q8NGT5 310 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 UBA3Q8TBC4 463 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 PHF10Q8WUB8 498 aaKnown RBP2.08□□□□□ -2.08
BRCA2-202ENST00000470094 ESR2Q92731 530 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 GTF2H4Q92759 462 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 SLC25A46Q96AG3 418 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 QKIQ96PU8 341 aaKnown RBP eCLIP2.08□□□□□ -2.08
BRCA2-202ENST00000470094 RNF5Q99942 180 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 IFT46Q9NQC8 304 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 DNAJC27Q9NZQ0 273 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 SNX24Q9Y343 169 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 ENPP4Q9Y6X5 453 aa2.08□□□□□ -2.08
BRCA2-202ENST00000470094 LRPPRCP42704 1394 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms