RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 RNF144BQ7Z419 303 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 MKXQ8IYA7 352 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 OR5T2Q8NGG2 359 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 OR8B3Q8NGG8 313 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 OR52N4Q8NGI2 321 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 FCGR1BQ92637 280 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 TMEM203Q969S6 136 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 RFT1Q96AA3 541 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 CPNE2Q96FN4 548 aaPredicted RBP9.97□□□□□ -0.81
VPS13D-204ENST00000469054 OR8B2Q96RD0 313 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 LPAR2Q9HBW0 351 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 HES4Q9HCC6 221 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 NOX4Q9NPH5 578 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 MTCH1Q9NZJ7 389 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 KAAG1Q9UBP8 84 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 SF3B6Q9Y3B4 125 aaKnown RBP9.97□□□□□ -0.81
VPS13D-204ENST00000469054 TANC2Q9HCD6 1990 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 TRAV8-7A0A075B6U6 113 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 OR2AT4A6NND4 320 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 A8MV72 311 aaPredicted RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 A8MXK9 166 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 TMPRSS2O15393 492 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 SPRY1O43609 319 aaPredicted RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 INMTO95050 263 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 NXPH2O95156 264 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 TNFAIP8O95379 198 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 PSG2P11465 335 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 AMY2BP19961 511 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 PSMA1P25786 263 aaKnown RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 ZFP36P26651 326 aaKnown RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 GABRA5P31644 462 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 DVL1P1P54792 670 aaPredicted RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 ZP1P60852 638 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 RPS25P62851 125 aaKnown RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 SSX1Q16384 188 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 SMIM21Q3B7S5 101 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 STUMQ69YW2 141 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 ZNF841Q6ZN19 808 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 SLC36A1Q7Z2H8 476 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 CEACAM19Q7Z692 300 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 SATL1Q86VE3 508 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 BATF2Q8N1L9 274 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 ZSCAN4Q8NAM6 433 aaPredicted RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 OR5D18Q8NGL1 313 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 OR51F2Q8NH61 342 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 ANGPTL6Q8NI99 470 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 SLAMF9Q96A28 289 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 TMEM186Q96B77 213 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 CEP19Q96LK0 163 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 CCL13Q99616 98 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 SSBP3Q9BWW4 388 aaPredicted RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 DNTTIP1Q9H147 329 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 YAE1D1Q9NRH1 226 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 CTSZQ9UBR2 303 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 KCNS2Q9ULS6 477 aa9.96□□□□□ -0.82
VPS13D-204ENST00000469054 POLR3KQ9Y2Y1 108 aaPredicted RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 FLNAP21333 2647 aaKnown RBP9.96□□□□□ -0.82
VPS13D-204ENST00000469054 CR1P17927 2039 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 TRAV20A0A0B4J274 112 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 IGKV1-12A0A0C4DH73 117 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 RFPL4AA6NLU0 287 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 RFPL4AL1F8VTS6 287 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 F8VVB4 439 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 F8VWA3 439 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 TRAPPC2LH3BP13 241 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 PHF1O43189 567 aaPredicted RBP9.95□□□□□ -0.82
VPS13D-204ENST00000469054 ANGPTL7O43827 346 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 KDM4BO94953 1096 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 IGKV1D-12P01611 117 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 MAS1P04201 325 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 TMEM225BP0DP42 221 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 PSMB9P28065 219 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 ZNF93P35789 620 aaPredicted RBP9.95□□□□□ -0.82
VPS13D-204ENST00000469054 NPBWR2P48146 333 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 PITPNBP48739 271 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 NPY4RP50391 375 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 GNB2P62879 340 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 LCN2P80188 198 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 FAM27D1Q5T7N8 215 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 DDI2Q5TDH0 399 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 WDR25Q64LD2 544 aaPredicted RBP9.95□□□□□ -0.82
VPS13D-204ENST00000469054 TMEM91Q6ZNR0 172 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 ZNF788Q6ZQV5 615 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 GLCCI1Q86VQ1 547 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 Q8IYB0 196 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 SAXO1Q8IYX7 474 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 PXT1Q8NFP0 134 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 TSPAN14Q8NG11 270 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 PHYHIPQ92561 330 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 GPER1Q99527 375 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 ZNF696Q9H7X3 374 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 SMURF1Q9HCE7 757 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 HIF1ANQ9NWT6 349 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 CLN8Q9UBY8 286 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 ABCA1O95477 2261 aa9.95□□□□□ -0.82
VPS13D-204ENST00000469054 MAP1AP78559 2803 aaPredicted RBP9.94□□□□□ -0.82
VPS13D-204ENST00000469054 IGKV1D-17A0A075B6S4 117 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 A0A087WXM4 84 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 PPIAL4CA0A0B4J2A2 164 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 A0A1B0GW55 424 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms