RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 EMG1Q92979 244 aaKnown RBP6.87□□□□□ -1.31
HDAC6-216ENST00000468949 SLC25A46Q96AG3 418 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 PHF21AQ96BD5 680 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 NKX3-1Q99801 234 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-216ENST00000468949 DCUN1D5Q9BTE7 237 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 MRI1Q9BV20 369 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 RBM38Q9H0Z9 239 aaKnown RBP6.87□□□□□ -1.31
HDAC6-216ENST00000468949 OR51I2Q9H344 312 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 GCM1Q9NP62 436 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 TMEM106BQ9NUM4 274 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 BEX4Q9NWD9 120 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-216ENST00000468949 TREM2Q9NZC2 230 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 CCDC59Q9P031 241 aaKnown RBP6.87□□□□□ -1.31
HDAC6-216ENST00000468949 RNF7Q9UBF6 113 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 GHRLQ9UBU3 117 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 TACC2O95359 2948 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 POLQO75417 2590 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 IGKV1-27A0A075B6S5 117 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 NKX6-3A6NJ46 265 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 ST8SIA5O15466 376 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 RGS5O15539 181 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 PPIHO43447 177 aaKnown RBP6.86□□□□□ -1.31
HDAC6-216ENST00000468949 AKR7A2O43488 359 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 ANGPTL7O43827 346 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 SSX4O60224 188 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 HTR3BO95264 441 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 BPNT1O95861 308 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 CYB5R3P00387 301 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-216ENST00000468949 HPXP02790 462 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 GTF2F2P13984 249 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 PRKACAP17612 351 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 ADRA2CP18825 462 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 MPZP25189 248 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 RPS19P39019 145 aaKnown RBP6.86□□□□□ -1.31
HDAC6-216ENST00000468949 PTH2RP49190 550 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 PDLIM4P50479 330 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 SNU13P55769 128 aaKnown RBP6.86□□□□□ -1.31
HDAC6-216ENST00000468949 CAV3P56539 151 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 MRPS11P82912 194 aaKnown RBP6.86□□□□□ -1.31
HDAC6-216ENST00000468949 MPPED2Q15777 294 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 FAM189A2Q15884 450 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 WDR82Q6UXN9 313 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF826PQ6ZT77 177 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 WDR86Q86TI4 376 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 CALHM1Q8IU99 346 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 BATF2Q8N1L9 274 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 POC1AQ8NBT0 407 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 PXT1Q8NFP0 134 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 OR4D6Q8NGJ1 314 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 OR10Z1Q8NGY1 313 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 TBC1D15Q8TC07 691 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 Q8TCH9 128 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 ACOT12Q8WYK0 555 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 RAB1CQ92928 201 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 FAM3DQ96BQ1 224 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 MBD6Q96DN6 1003 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 FOXC2Q99958 501 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 PIMREGQ9BSJ6 248 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 URM1Q9BTM9 101 aaKnown RBP6.86□□□□□ -1.31
HDAC6-216ENST00000468949 TMEM59Q9BXS4 323 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 FGF23Q9GZV9 251 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-216ENST00000468949 TLNRD1Q9H1K6 362 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 CHODLQ9H9P2 273 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 LIN7BQ9HAP6 207 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 RHOFQ9HBH0 211 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 ADAM30Q9UKF2 790 aa6.86□□□□□ -1.31
HDAC6-216ENST00000468949 CCDC168Q8NDH2 2452 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 TRAV38-1A0A0B4J264 116 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 SHISA3A0PJX4 238 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 OVOL3O00110 214 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 SYNGR1O43759 233 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 RHBDL1O75783 438 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 PTBP3O95758 552 aaKnown RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 MPIG6BO95866 241 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 PGA5P0DJD9 388 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 CALCBP10092 127 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 SLC2A2P11168 524 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF182P17025 639 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 BCL3P20749 454 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 CD80P33681 288 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 GPR6P46095 362 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 SMCPP49901 116 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 CLDN12P56749 244 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 SCAND1P57086 179 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 DSCR9P59020 149 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 ZP1P60852 638 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 MICBQ29980 383 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF181Q2M3W8 571 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 DEFB113Q30KQ7 82 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 FAM76BQ5HYJ3 339 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 C1orf100Q5SVJ3 147 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 OR2W3Q7Z3T1 314 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 FAM58AQ8N1B3 248 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 OSR2Q8N2R0 312 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 MUC20Q8N307 709 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 OR51D1Q8NGF3 324 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 OR10K1Q8NGX5 313 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 KCNG3Q8TAE7 436 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 LGALS14Q8TCE9 139 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms