RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 CSGALNACT2Q8N6G5 542 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 DRAXINQ8NBI3 349 aaPredicted RBP2.97□□□□□ -1.93
LSM5-209ENST00000468872 OR10G6Q8NH81 332 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 HAUS1Q96CS2 278 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 SCGB3A2Q96PL1 93 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 GGTLC1Q9BX51 225 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 C11orf49Q9H6J7 331 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 NDUFC2-KCTD14E9PQ53 114 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 BET1O15155 118 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 SLC19A2O60779 497 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 GLSO94925 669 aaPredicted RBP2.96□□□□□ -1.94
LSM5-209ENST00000468872 PRKACAP17612 351 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 PMCHP20382 165 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 LOXP28300 417 aaPredicted RBP2.96□□□□□ -1.94
LSM5-209ENST00000468872 GGT2P36268 569 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 CFHR2P36980 270 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 TALDO1P37837 337 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 OPRK1P41145 380 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 CXCL12P48061 93 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 PSMD4P55036 377 aaKnown RBP2.96□□□□□ -1.94
LSM5-209ENST00000468872 MOBPQ13875 183 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 NKAIN1Q4KMZ8 207 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 RNASE13Q5GAN3 156 aaKnown RBP2.96□□□□□ -1.94
LSM5-209ENST00000468872 ULK3Q6PHR2 472 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 VTCN1Q7Z7D3 282 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 ZNF461Q8TAF7 563 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 TOP1MTQ969P6 601 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 TMIGD2Q96BF3 282 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 RBBP8Q99708 897 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 TMEM243Q9BU79 118 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 FBXO44Q9H4M3 255 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 TDRD3Q9H7E2 651 aaKnown RBP2.96□□□□□ -1.94
LSM5-209ENST00000468872 DYRK4Q9NR20 520 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 C8orf17Q9NRJ1 99 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 CYTL1Q9NRR1 136 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 ZMAT5Q9UDW3 170 aaKnown RBP2.96□□□□□ -1.94
LSM5-209ENST00000468872 CACNA1SQ13698 1873 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 BOD1L1Q8NFC6 3051 aa2.96□□□□□ -1.94
LSM5-209ENST00000468872 MYO9BQ13459 2157 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 ANKARQ7Z5J8 1434 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 IGKV1-27A0A075B6S5 117 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 TRAV6A0A075B6T7 132 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 S100A9P06702 114 aaKnown RBP2.95□□□□□ -1.94
LSM5-209ENST00000468872 C1GALT1C1LP0DN25 315 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 MYL9P24844 172 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 NPY1RP25929 384 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 HTR1DP28221 377 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 TAS2R31P59538 309 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 TPRG1LQ5T0D9 272 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 IQCF2Q8IXL9 164 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 OR5T3Q8NGG3 340 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 LINC01560Q8TB33 94 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 L3HYPDHQ96EM0 354 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 SPIN2AQ99865 258 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 RNF5Q99942 180 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 SPIN2BQ9BPZ2 258 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 XKR8Q9H6D3 395 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 ZNF257Q9Y2Q1 563 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 MTORP42345 2549 aa2.95□□□□□ -1.94
LSM5-209ENST00000468872 PTPRQQ9UMZ3 2332 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 SLX4Q8IY92 1834 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 LOC100653049A0A140TA62 436 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 H3BN98 237 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 ZNF701M0R085 212 aaPredicted RBP2.94□□□□□ -1.94
LSM5-209ENST00000468872 TNFRSF11BO00300 401 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 CHST10O43529 356 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 RAD1O60671 282 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 CTNSO60931 367 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 KRT34O76011 436 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 CCNE2O96020 404 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 KLK1P06870 262 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 TPM1P09493 284 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 ZNF688P0C7X2 276 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 GFAPP14136 432 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 AP1S2P56377 157 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 CLDN6P56747 220 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 OR2B8PP59922 312 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 SIGLEC14Q08ET2 396 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 CDC20Q12834 499 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 WDR43Q15061 677 aaKnown RBP eCLIP2.94□□□□□ -1.94
LSM5-209ENST00000468872 FBXO48Q5FWF7 155 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 MLIPQ5VWP3 458 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 ZFP1Q6P2D0 407 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 RTL4Q6ZR62 310 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 RAB43Q86YS6 212 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 C19orf18Q8NEA5 215 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 OR8K3Q8NH51 312 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 LILRB4Q8NHJ6 448 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 ASZ1Q8WWH4 475 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 C19orf60Q96EN9 201 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 STMN4Q9H169 189 aaPredicted RBP2.94□□□□□ -1.94
LSM5-209ENST00000468872 REEP1Q9H902 201 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 FBXO8Q9NRD0 319 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 MTCH2Q9Y6C9 303 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 RGPD5Q99666 1765 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 MYO10Q9HD67 2058 aa2.94□□□□□ -1.94
LSM5-209ENST00000468872 SPENQ96T58 3664 aaKnown RBP2.94□□□□□ -1.94
LSM5-209ENST00000468872 LTBP2Q14767 1821 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 PPLO60437 1756 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms