RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SLC1A7O00341 560 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 NDUFA7O95182 113 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 TFF1P04155 84 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 FBP1P09467 338 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 PGA5P0DJD9 388 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 IER3P46695 156 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 DMRTC1Q5HYR2 192 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 ENTHD1Q8IYW4 607 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 ZNF561Q8N587 486 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 ZNRF1Q8ND25 227 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 TMEM185AQ8NFB2 350 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 Q96MT0 163 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 ZNF696Q9H7X3 374 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 SLC7A11Q9UPY5 501 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 MAB21L2Q9Y586 359 aa15.67■□□□□ 0.1
COL7A1-207ENST00000467985 ANKRD61A6NGH8 418 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 E9PQ18 207 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 SYT7O43581 403 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 NXPH2O95156 264 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 GNAO1P09471 354 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 MDKP21741 143 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-207ENST00000467985 MPZP25189 248 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 UBE2E1P51965 193 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 CAPZA1P52907 286 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 RAG2P55895 527 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 SNRPGP62308 76 aaKnown RBP15.66■□□□□ 0.1
COL7A1-207ENST00000467985 PRR31Q5SQ13 230 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 MEDAGQ5VYS4 303 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 FAM220AQ7Z4H9 259 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 OR5D13Q8NGL4 314 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 RORBQ92753 470 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 UBE2FQ969M7 185 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 NRIP2Q9BQI9 281 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 PKIBQ9C010 78 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 HSPE1-MOB4S4R3N1 261 aa15.66■□□□□ 0.1
COL7A1-207ENST00000467985 A0A1W2PPH5 198 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 RFPL4AA6NLU0 287 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 RFPL4AL1F8VTS6 287 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 RNASEK-C17orf49H0YIS7 233 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 NPFFO15130 113 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 GATBO75879 557 aaKnown RBP15.65■□□□□ 0.1
COL7A1-207ENST00000467985 APOL3O95236 402 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 OMGP23515 440 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 PRDX2P32119 198 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 ACTC1P68032 377 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 ACTA1P68133 377 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 ACSM1Q08AH1 577 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 IL24Q13007 206 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 SLC25A30Q5SVS4 291 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 KCTD20Q7Z5Y7 419 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 TNFRSF14Q92956 283 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 C10orf35Q96D05 121 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 CNBD2Q96M20 576 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 C1RLQ9NZP8 487 aa15.65■□□□□ 0.1
COL7A1-207ENST00000467985 BTBD17A6NE02 478 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 SYNGR1O43759 233 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 PAHP00439 452 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 SERPINA3P01011 423 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 KNG1P01042 644 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 IGHV4-59P01825 116 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 UBCP0CG48 685 aaKnown RBP15.64■□□□□ 0.09
COL7A1-207ENST00000467985 ODF4Q2M2E3 257 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 GDPGP1Q6ZNW5 385 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 CD177Q8N6Q3 437 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 RHOXF1Q8NHV9 184 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 CNIH3Q8TBE1 160 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 ZNF488Q96MN9 340 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 ANKRD60Q9BZ19 345 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 HES4Q9HCC6 221 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 AASSQ9UDR5 926 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 GNG8Q9UK08 70 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 VWFP04275 2813 aa15.64■□□□□ 0.09
COL7A1-207ENST00000467985 A6NIN4 97 aa15.63■□□□□ 0.09
COL7A1-207ENST00000467985 GPR137BO60478 399 aa15.63■□□□□ 0.09
COL7A1-207ENST00000467985 ENTPD6O75354 484 aa15.63■□□□□ 0.09
COL7A1-207ENST00000467985 ISL1P61371 349 aa15.63■□□□□ 0.09
COL7A1-207ENST00000467985 RPL31P62899 125 aaKnown RBP15.63■□□□□ 0.09
COL7A1-207ENST00000467985 OCLNQ16625 522 aa15.63■□□□□ 0.09
COL7A1-207ENST00000467985 FAM185AQ8N0U4 392 aa15.63■□□□□ 0.09
COL7A1-207ENST00000467985 PP6455Q8WZ26 134 aa15.63■□□□□ 0.09
COL7A1-207ENST00000467985 TAF15Q92804 592 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL7A1-207ENST00000467985 MYCBPQ99417 103 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-207ENST00000467985 FAM234AQ9H0X4 552 aa15.63■□□□□ 0.09
COL7A1-207ENST00000467985 ELL3Q9HB65 397 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-207ENST00000467985 ZNRD1Q9P1U0 126 aa15.63■□□□□ 0.09
COL7A1-207ENST00000467985 SF3B6Q9Y3B4 125 aaKnown RBP15.63■□□□□ 0.09
COL7A1-207ENST00000467985 hCG_1809904A0A1W2PP81 198 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 A0A1W2PPE2 198 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 FAM230AA0A1W2PPH8 454 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 A0A1W2PR64 198 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 A0A1W2PRV1 198 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 MEIOCA2RUB1 952 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 MYF6P23409 242 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 SAA4P35542 130 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 FUT6P51993 359 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 ERVK11-1P61568 191 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 RELBQ01201 579 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 ZNF85Q03923 595 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 KLRD1Q13241 179 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 OLFML2AQ68BL7 652 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms