RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FAM110AQ9BQ89 295 aa7.97□□□□□ -1.13
HDAC3-203ENST00000467533 NRIP2Q9BQI9 281 aa7.97□□□□□ -1.13
HDAC3-203ENST00000467533 GON7Q9BXV9 100 aa7.97□□□□□ -1.13
HDAC3-203ENST00000467533 RETNQ9HD89 108 aa7.97□□□□□ -1.13
HDAC3-203ENST00000467533 ZNF319Q9P2F9 582 aa7.97□□□□□ -1.13
HDAC3-203ENST00000467533 COMMD3-BMI1R4GMX3 469 aa7.97□□□□□ -1.13
HDAC3-203ENST00000467533 hADV38S2A0JD32 116 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 ARRDC5A6NEK1 342 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 A8MZ25 164 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 AP4M1O00189 453 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 FGF16O43320 207 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 APOC1P02654 83 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 ELANEP08246 267 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 TMEM11P17152 192 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 BDH1Q02338 343 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 MEF2CQ06413 473 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-203ENST00000467533 ZNF616Q08AN1 781 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 FGD3Q5JSP0 725 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 TPTE2P1Q5T6R2 138 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 ERICH5Q6P6B1 374 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 VTCN1Q7Z7D3 282 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 TRAPPC6BQ86SZ2 158 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 ABHD12Q8N2K0 398 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 FAM81AQ8TBF8 368 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 EME1Q96AY2 570 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 EBF4Q9BQW3 602 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 IFT27Q9BW83 186 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 RGCCQ9H4X1 137 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 RABEP2Q9H5N1 569 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 VIPAS39Q9H9C1 493 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 SLC22A13Q9Y226 551 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 LINC00312Q9Y6C7 94 aa7.96□□□□□ -1.14
HDAC3-203ENST00000467533 DHRS12A0PJE2 317 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 OR5B21A6NL26 309 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 ARPC3O15145 178 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 MMP23AO75900 390 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 ARSBP15848 533 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 KDELR2P33947 212 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 OMPP47874 163 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 SELENOWP63302 87 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.95□□□□□ -1.14
HDAC3-203ENST00000467533 RBM39Q14498 530 aaKnown RBP7.95□□□□□ -1.14
HDAC3-203ENST00000467533 CEACAM21Q3KPI0 293 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 PRAMEF5Q5TYX0 476 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 ASPHD1Q5U4P2 390 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 BAIAP2L2Q6UXY1 529 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 PRSS45Q7RTY3 260 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 RTN4RL2Q86UN3 420 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 OR8H2Q8N162 312 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 TPRX1Q8N7U7 411 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 OR51L1Q8NGJ5 315 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 OR1N2Q8NGR9 330 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 OR56B4Q8NH76 319 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.95□□□□□ -1.148e-7■■■■■ 32.1
HDAC3-203ENST00000467533 DCUN1D4Q92564 292 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 CREB3L1Q96BA8 519 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 OR52D1Q9H346 318 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 GHITMQ9H3K2 345 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 ANKRD19PQ9H560 264 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 KIAA1456Q9P272 454 aa7.95□□□□□ -1.14
HDAC3-203ENST00000467533 LINC01548A6NM66 108 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 TOR1AO14656 332 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 IDH3AP50213 366 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 HNF4GQ14541 408 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 HLA-DRB5Q30154 266 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 SLC35F1Q5T1Q4 408 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 RNLSQ5VYX0 342 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 PLCXD3Q63HM9 321 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 OR52W1Q6IF63 320 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 MOB3CQ70IA8 216 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 CYP4Z1Q86W10 505 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 Q8N1Y9 231 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 FAM71E2Q8N5Q1 922 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 FAM86B1Q8N7N1 296 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 RNF152Q8N8N0 203 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 OR2T4Q8NH00 348 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 ZNRF4Q8WWF5 429 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 TOMM40LQ969M1 308 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 OR5B12Q96R08 314 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 CCDC28BQ9BUN5 200 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 TMEM109Q9BVC6 243 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 ST6GALNAC5Q9BVH7 336 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 POLDIP2Q9Y2S7 368 aa7.94□□□□□ -1.14
HDAC3-203ENST00000467533 OOSP1A8MZH6 123 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 BUB1B-PAK6H3BSN5 160 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 J3QT63 122 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 ZNF593O00488 134 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-203ENST00000467533 RRP9O43818 475 aaKnown RBP7.93□□□□□ -1.14
HDAC3-203ENST00000467533 PSPNO60542 156 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 ZNF737O75373 536 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 DEDDO75618 318 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 ZNF682O95780 498 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 IGLV1-47P01700 117 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 FSTP19883 344 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 FMO3P31513 532 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 HAAOP46952 286 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 GPR12P47775 334 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 ESRRGP62508 458 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 IFI44LQ53G44 452 aa7.93□□□□□ -1.14
HDAC3-203ENST00000467533 HAPLN4Q86UW8 402 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms