RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 TMEM225BP0DP42 221 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 MPZP25189 248 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
UBA3-209ENST00000466763 TGFBR2P37173 567 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 EMX1Q04741 257 aaPredicted RBP11.59□□□□□ -0.55
UBA3-209ENST00000466763 MLLT11Q13015 90 aaPredicted RBP11.59□□□□□ -0.55
UBA3-209ENST00000466763 SMIM21Q3B7S5 101 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 ACSM3Q53FZ2 586 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 ACP7Q6ZNF0 438 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 ZNF367Q7RTV3 350 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 RNF144BQ7Z419 303 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 MS4A15Q8N5U1 240 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 TMEM186Q96B77 213 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 CEP19Q96LK0 163 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 SSBP3Q9BWW4 388 aaPredicted RBP11.59□□□□□ -0.55
UBA3-209ENST00000466763 ISYNA1Q9NPH2 558 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 RASL12Q9NYN1 266 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 CLN8Q9UBY8 286 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 OR14J1Q9UGF5 321 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 OR5V1Q9UGF6 321 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 LRCH1Q9Y2L9 728 aa11.59□□□□□ -0.55
UBA3-209ENST00000466763 SONP18583 2426 aaKnown RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 TRAV20A0A0B4J274 112 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 CALCBP10092 127 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 MAPK3P27361 379 aaPredicted RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 PSMB9P28065 219 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 BDKRB2P30411 391 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 DVL1P1P54792 670 aaPredicted RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 SNU13P55769 128 aaKnown RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 PDZK1IP1Q13113 114 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 IKZF1Q13422 519 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 GPR50Q13585 617 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 TPBGQ13641 420 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 INSL4Q14641 139 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 KISS1Q15726 138 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 ARMCX4Q5H9R4 360 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 DDI2Q5TDH0 399 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 ASPHD2Q6ICH7 369 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 FAHD2BQ6P2I3 314 aaPredicted RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 SLC36A1Q7Z2H8 476 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 CEACAM19Q7Z692 300 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 SPARTQ8N0X7 666 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 OR52N4Q8NGI2 321 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 ST8SIA4Q92187 359 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 THRSPQ92748 146 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 EMG1Q92979 244 aaKnown RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 C12orf43Q96C57 262 aaKnown RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 CPNE2Q96FN4 548 aaPredicted RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 FAHD2AQ96GK7 314 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 DERL3Q96Q80 235 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 NKX3-1Q99801 234 aaPredicted RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 NRIP2Q9BQI9 281 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 FAM192AQ9GZU8 254 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 ELL3Q9HB65 397 aaPredicted RBP11.58□□□□□ -0.56
UBA3-209ENST00000466763 NOX4Q9NPH5 578 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 TMEM138Q9NPI0 162 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 MTCH1Q9NZJ7 389 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 CTSZQ9UBR2 303 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 MTORP42345 2549 aa11.58□□□□□ -0.56
UBA3-209ENST00000466763 ZANQ9Y493 2812 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 TRAV8-7A0A075B6U6 113 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 TRBV5-7A0A0A0MS05 114 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 A0A1B0GW55 424 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 RFPL4AA6NLU0 287 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 RFPL4AL1F8VTS6 287 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DVL1O14640 695 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 NDUFB3O43676 98 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 NOS1APO75052 506 aaPredicted RBP11.57□□□□□ -0.56
UBA3-209ENST00000466763 ALX3O95076 343 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 MAS1P04201 325 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DUX4L2P0CJ85 424 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DUX4L3P0CJ86 424 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DUX4L4P0CJ87 422 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DUX4L5P0CJ88 424 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DUX4L6P0CJ89 424 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DUX4L7P0CJ90 424 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 PSG2P11465 335 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 CPEP16870 476 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 BCL3P20749 454 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 CPT2P23786 658 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 NPBWR2P48146 333 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 CEBPDP49716 269 aaPredicted RBP11.57□□□□□ -0.56
UBA3-209ENST00000466763 CAPZA1P52907 286 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 RPS25P62851 125 aaKnown RBP11.57□□□□□ -0.56
UBA3-209ENST00000466763 CR1LQ2VPA4 569 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DCAF12L2Q5VW00 463 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 WDR25Q64LD2 544 aaPredicted RBP11.57□□□□□ -0.56
UBA3-209ENST00000466763 STUMQ69YW2 141 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 ZNF773Q6PK81 442 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DUX4L9Q6RFH8 374 aaPredicted RBP11.57□□□□□ -0.56
UBA3-209ENST00000466763 FAM216BQ8N7L0 139 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 MED30Q96HR3 178 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 DUX4Q9UBX2 424 aa11.57□□□□□ -0.56
UBA3-209ENST00000466763 A0A0G2JMP0 313 aa11.56□□□□□ -0.56
UBA3-209ENST00000466763 A0A0X1KG70 313 aa11.56□□□□□ -0.56
UBA3-209ENST00000466763 F8VVB4 439 aa11.56□□□□□ -0.56
UBA3-209ENST00000466763 F8VWA3 439 aa11.56□□□□□ -0.56
UBA3-209ENST00000466763 TNFRSF13BO14836 293 aaPredicted RBP11.56□□□□□ -0.56
UBA3-209ENST00000466763 PIN1P1O15428 100 aa11.56□□□□□ -0.56
UBA3-209ENST00000466763 PRKACAP17612 351 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms