RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 DNAJC8O75937 253 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-206ENST00000466532 TK1P04183 234 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 CCL3L1P16619 93 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 KIR2DS4P43632 304 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 BMXP51813 675 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 EFNB2P52799 333 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 LGALS4P56470 323 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 ERVFRD-1P60508 538 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 ZNF273Q14593 569 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 AADACL4Q5VUY2 407 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 SLX4IPQ5VYV7 408 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 TMEM163Q8TC26 289 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 HES4Q9HCC6 221 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 RAB18Q9NP72 206 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 CLN6Q9NWW5 311 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 MRM2Q9UI43 246 aaKnown RBP15.56■□□□□ 0.08
COL9A3-206ENST00000466532 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL9A3-206ENST00000466532 PIPP12273 146 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-206ENST00000466532 MPZP25189 248 aa15.55■□□□□ 0.08
COL9A3-206ENST00000466532 EPHA2P29317 976 aa15.55■□□□□ 0.08
COL9A3-206ENST00000466532 EFNB1P98172 346 aa15.55■□□□□ 0.08
COL9A3-206ENST00000466532 C11orf88Q6PI97 169 aa15.55■□□□□ 0.08
COL9A3-206ENST00000466532 CRIP3Q6Q6R5 217 aa15.55■□□□□ 0.08
COL9A3-206ENST00000466532 ZNF782Q6ZMW2 699 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-206ENST00000466532 CALHM1Q8IU99 346 aa15.55■□□□□ 0.08
COL9A3-206ENST00000466532 OR2T6Q8NHC8 308 aa15.55■□□□□ 0.08
COL9A3-206ENST00000466532 IL4I1Q96RQ9 567 aa15.55■□□□□ 0.08
COL9A3-206ENST00000466532 RANBP3Q9H6Z4 567 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-206ENST00000466532 SLC22A13Q9Y226 551 aa15.55■□□□□ 0.08
COL9A3-206ENST00000466532 A0A0G2JK05 382 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 DHRS7CA6NNS2 312 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 ZAR1LA6NP61 321 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 RPP14O95059 124 aaKnown RBP15.54■□□□□ 0.08
COL9A3-206ENST00000466532 C12orf73Q69YU5 71 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 Q6ZSR3 168 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 ANGPTL5Q86XS5 388 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 GID4Q8IVV7 300 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 C11orf44Q8N8P7 122 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 TRMT10AQ8TBZ6 339 aaKnown RBP15.54■□□□□ 0.08
COL9A3-206ENST00000466532 TBX5Q99593 518 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 FOXJ3Q9UPW0 622 aa15.54■□□□□ 0.08
COL9A3-206ENST00000466532 FAM230AA0A1W2PPH8 454 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 G3V2T6 193 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 H3BSH0 61 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 CHST1O43916 411 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 KRT8P05787 483 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 ERVK11-1P61568 191 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 IL24Q13007 206 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 ATP6AP1Q15904 470 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 ODF4Q2M2E3 257 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 HIST2H2BDQ6DRA6 164 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 LIAT1Q6ZQX7 453 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 SSX6Q7RTT6 188 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 LHFPL4Q7Z7J7 247 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 KLHDC1Q8N7A1 406 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 YIPF7Q8N8F6 280 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 ASCC1Q8N9N2 400 aaKnown RBP15.53■□□□□ 0.08
COL9A3-206ENST00000466532 PKIBQ9C010 78 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 NPFFR1Q9GZQ6 430 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 PLEKHA1Q9HB21 404 aa15.53■□□□□ 0.08
COL9A3-206ENST00000466532 C17orf98A8MV24 154 aa15.52■□□□□ 0.08
COL9A3-206ENST00000466532 K7N7A8 449 aa15.52■□□□□ 0.08
COL9A3-206ENST00000466532 CCL1P22362 96 aa15.52■□□□□ 0.08
COL9A3-206ENST00000466532 COL10A1Q03692 680 aa15.52■□□□□ 0.08
COL9A3-206ENST00000466532 PLA1AQ53H76 456 aa15.52■□□□□ 0.08
COL9A3-206ENST00000466532 PIFOQ8TCI5 191 aa15.52■□□□□ 0.08
COL9A3-206ENST00000466532 BCAS4Q8TDM0 211 aa15.52■□□□□ 0.08
COL9A3-206ENST00000466532 NKX3-1Q99801 234 aaPredicted RBP15.52■□□□□ 0.08
COL9A3-206ENST00000466532 CADM1Q9BY67 442 aaKnown RBP15.52■□□□□ 0.08
COL9A3-206ENST00000466532 SLC7A11Q9UPY5 501 aa15.52■□□□□ 0.08
COL9A3-206ENST00000466532 MEX3AA1L020 520 aaKnown RBP15.51■□□□□ 0.07
COL9A3-206ENST00000466532 VSIG10L2P0DP72 767 aa15.51■□□□□ 0.07
COL9A3-206ENST00000466532 DLX6P56179 175 aa15.51■□□□□ 0.07
COL9A3-206ENST00000466532 EDDM3BP56851 147 aa15.51■□□□□ 0.07
COL9A3-206ENST00000466532 KDM4DQ6B0I6 523 aa15.51■□□□□ 0.07
COL9A3-206ENST00000466532 CATSPERDQ86XM0 798 aa15.51■□□□□ 0.07
COL9A3-206ENST00000466532 DTX3Q8N9I9 347 aa15.51■□□□□ 0.07
COL9A3-206ENST00000466532 CFHR4Q92496 578 aa15.51■□□□□ 0.07
COL9A3-206ENST00000466532 GABARAPL1Q9H0R8 117 aa15.51■□□□□ 0.07
COL9A3-206ENST00000466532 WARS2Q9UGM6 360 aaKnown RBP15.51■□□□□ 0.07
COL9A3-206ENST00000466532 MEGF11A6BM72 1044 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 FAM90A8PA6NJQ4 464 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 F8VVB4 439 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 F8VWA3 439 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 SYT7O43581 403 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 ARG1P05089 322 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 CHRM2P08172 466 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 UBE2V2Q15819 145 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 GDPD3Q7L5L3 318 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 ZDHHC13Q8IUH4 622 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 DYNAPQ8N1N2 210 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 OR13D1Q8NGV5 346 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 SLAMF9Q96A28 289 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 CEP19Q96LK0 163 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 MTCH1Q9NZJ7 389 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 ENOPH1Q9UHY7 261 aa15.5■□□□□ 0.07
COL9A3-206ENST00000466532 TBL2Q9Y4P3 447 aaKnown RBP15.5■□□□□ 0.07
COL9A3-206ENST00000466532 IGKV1-27A0A075B6S5 117 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 A0A1W2PQL4 384 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-206ENST00000466532 METTL15A6NJ78 407 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms