RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ZNF823P16415 610 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 HTR5AP47898 357 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 GP2P55259 537 aaKnown RBP11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 TAS2R43P59537 309 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 BDH1Q02338 343 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 MLLT11Q13015 90 aaPredicted RBP11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 KLRD1Q13241 179 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 MAB21L1Q13394 359 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 SLC25A47Q6Q0C1 308 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 FAM220AQ7Z4H9 259 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 SYT9Q86SS6 491 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 LHFPL3Q86UP9 236 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 EGFL6Q8IUX8 553 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 TIGD4Q8IY51 512 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 PNKDQ8N490 385 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 LY6G5BQ8NDX9 201 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 Q8NFD4 153 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 DMRTB1Q96MA1 342 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 TBX5Q99593 518 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 MGLLQ99685 303 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 NKX3-1Q99801 234 aaPredicted RBP11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 WNT10AQ9GZT5 417 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 CLEC2DQ9UHP7 191 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 KCNG2Q9UJ96 466 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 LAMP5Q9UJQ1 280 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 COA3Q9Y2R0 106 aaPredicted RBP11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 LSM2Q9Y333 95 aaKnown RBP11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 TRAV38-1A0A0B4J264 116 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 A0A1W2PPL8 197 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 A0A1W2PQL4 384 aaPredicted RBP11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 J3QW42 95 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 PEX14O75381 377 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 RGS6P49758 472 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 ENTPD1P49961 510 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 MRPL28Q13084 256 aaKnown RBP11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 ENDOGQ14249 297 aaKnown RBP11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 OR8B8Q15620 311 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 AANATQ16613 207 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 LRRC75BQ2VPJ9 315 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 TIMM50Q3ZCQ8 353 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 ZNF322Q6U7Q0 402 aaPredicted RBP11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 SYS1Q8N2H4 156 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 ZNF511Q8NB15 262 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 SLC26A10Q8NG04 563 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 ZNRF4Q8WWF5 429 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 ASB17Q8WXJ9 295 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 ST8SIA4Q92187 359 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 OR5M11Q96RB7 305 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 BCL7BQ9BQE9 202 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 DCTN5Q9BTE1 182 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 TMEM100Q9NV29 134 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 RNF7Q9UBF6 113 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 RSL24D1Q9UHA3 163 aaKnown RBP11.93□□□□□ -0.5
HMGXB4-206ENST00000466438 TVP23AA6NH52 213 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 IQCF6A8MYZ5 107 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 ZNF701M0R085 212 aaPredicted RBP11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 CCRL2O00421 344 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 DOK2O60496 412 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 HLA-DPB1P04440 258 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 SCG5P05408 212 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 SPARCP09486 303 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 UBE2E1P51965 193 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 DLX1P56177 255 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 CD83Q01151 205 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 ZNF85Q03923 595 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 TEX30Q5JUR7 227 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 SLC18B1Q6NT16 456 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 PLEKHG7Q6ZR37 379 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 FOXL2NBQ6ZUU3 175 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 KCTD20Q7Z5Y7 419 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 CLVS1Q8IUQ0 354 aaPredicted RBP11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 Q8N7P7 452 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 BHLHE23Q8NDY6 225 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 OTOSQ8NHW6 89 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 RAB2BQ8WUD1 216 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 UFD1Q92890 307 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 TNFRSF14Q92956 283 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 DGCR14Q96DF8 476 aaKnown RBP11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 UFSP2Q9NUQ7 469 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 PTTG3PQ9NZH4 202 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 POLR1DQ9Y2S0 133 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 HERC2O95714 4834 aa11.92□□□□□ -0.5
HMGXB4-206ENST00000466438 OOEPA6NGQ2 149 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 GYPAP02724 150 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 KRT8P05787 483 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 CHRM2P08172 466 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 MSR1P21757 451 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 CD200P41217 278 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 TMBIM6P55061 237 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 MPPED2Q15777 294 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 OR2G6Q5TZ20 316 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 GPR107Q5VW38 600 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 PRAMEF6Q5VXH4 476 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 KCTD18Q6PI47 426 aaPredicted RBP11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 LYPD4Q6UWN0 246 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 BOLLQ8N9W6 283 aaKnown RBP11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 OR5L1Q8NGL2 311 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 C17orf50Q8WW18 174 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 SPRYD4Q8WW59 207 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms