RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 C11orf88Q6PI97 169 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 C12orf45Q8N5I9 185 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-206ENST00000466379 SLAMF9Q96A28 289 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 SLC23A1Q9UHI7 598 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 ST3GAL6Q9Y274 331 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 SPTBN2O15020 2390 aa11.66□□□□□ -0.54
UBE4B-206ENST00000466379 FAM221AA4D161 298 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 H3BUI4 141 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 SLC22A5O76082 557 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 OR2A4O95047 310 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF14P17017 642 aaPredicted RBP11.65□□□□□ -0.54
UBE4B-206ENST00000466379 UBE2NP61088 152 aaKnown RBP11.65□□□□□ -0.54
UBE4B-206ENST00000466379 BAMBIQ13145 260 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 ZMYND11Q15326 602 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 VAX1Q5SQQ9 334 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 OR2T2Q6IF00 324 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 RPUSD3Q6P087 351 aaKnown RBP11.65□□□□□ -0.54
UBE4B-206ENST00000466379 SLC25A42Q86VD7 318 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 FTMTQ8N4E7 242 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 ZDHHC22Q8N966 263 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 PXT1Q8NFP0 134 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 OR10AD1Q8NGE0 317 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 OR13G1Q8NGZ3 307 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 SNIP1Q8TAD8 396 aaKnown RBP11.65□□□□□ -0.54
UBE4B-206ENST00000466379 TECTBQ96PL2 329 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 OR2A7Q96R45 310 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 GON7Q9BXV9 100 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 EHFQ9NZC4 300 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 SVILO95425 2214 aa11.65□□□□□ -0.54
UBE4B-206ENST00000466379 ZNF732B4DXR9 585 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 C3orf80F5H4A9 247 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 F8VVB4 439 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 F8VWA3 439 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 AGFG2O95081 481 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 PI3P19957 117 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 BCL3P20749 454 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 CHATP28329 748 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 OR3A3P47888 321 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 ERVS71-1P61550 626 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 GABRA6Q16445 453 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 TBC1D28Q2M2D7 210 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 Q6ZT83 130 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 DPPA2Q7Z7J5 298 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 WNT2BQ93097 391 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 MYOZ1Q9NP98 299 aaPredicted RBP11.65□□□□□ -0.55
UBE4B-206ENST00000466379 DKK4Q9UBT3 224 aa11.65□□□□□ -0.55
UBE4B-206ENST00000466379 NOP16Q9Y3C1 178 aaKnown RBP11.65□□□□□ -0.55
UBE4B-206ENST00000466379 F5H5P2 479 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 CCSO14618 274 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 CST4P01036 141 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 ZBTB25P24278 435 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 CD34P28906 385 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 OPRM1P35372 400 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 RAP2BP61225 183 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 CEACAM21Q3KPI0 293 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 ACTBL2Q562R1 376 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 RBMXL3Q8N7X1 1067 aaKnown RBP11.64□□□□□ -0.55
UBE4B-206ENST00000466379 TERB2Q8NHR7 220 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 CASTOR1Q8WTX7 329 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 GPR137Q96N19 417 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 IL36GQ9NZH8 169 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 IL36RNQ9UBH0 155 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 OPN4Q9UHM6 478 aa11.64□□□□□ -0.55
UBE4B-206ENST00000466379 TMEM238LA0A1B0GVL6 79 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 ZNF81P51508 661 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 RBM11P57052 281 aaKnown RBP11.63□□□□□ -0.55
UBE4B-206ENST00000466379 TGFBR3Q03167 851 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 DAZAP2Q15038 168 aaPredicted RBP11.63□□□□□ -0.55
UBE4B-206ENST00000466379 CHRFAM7AQ494W8 412 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 LYG2Q86SG7 212 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 MICU1Q9BPX6 476 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 CMSS1Q9BQ75 279 aaKnown RBP11.63□□□□□ -0.55
UBE4B-206ENST00000466379 C9orf170A2RU37 121 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 PROB1E7EW31 1015 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 ARL6IP1Q15041 203 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 LY6G6FQ5SQ64 297 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 Q6ZS92 163 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 SEM1Q6ZVN7 128 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 ARRDC1Q8N5I2 433 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 ZSCAN4Q8NAM6 433 aaPredicted RBP11.63□□□□□ -0.55
UBE4B-206ENST00000466379 OR5AP2Q8NGF4 316 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 OPN3Q9H1Y3 402 aaPredicted RBP11.63□□□□□ -0.55
UBE4B-206ENST00000466379 PPA2Q9H2U2 334 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 LHX6Q9UPM6 363 aa11.63□□□□□ -0.55
UBE4B-206ENST00000466379 ANKRD30BLA7E2S9 258 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 SYNGR1O43759 233 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 SMPD2O60906 423 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 NOS1APO75052 506 aaPredicted RBP11.62□□□□□ -0.55
UBE4B-206ENST00000466379 CA11O75493 328 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 OR7C1O76099 320 aaPredicted RBP11.62□□□□□ -0.55
UBE4B-206ENST00000466379 ZNF205O95201 554 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 CA6P23280 308 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 TAS2R46P59540 309 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 IL13RA1P78552 427 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 AADACL3Q5VUY0 350 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 RPRMLQ8N4K4 120 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 OR6K3Q8NGY3 331 aa11.62□□□□□ -0.55
UBE4B-206ENST00000466379 ZNF488Q96MN9 340 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms