RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 DEGS2Q6QHC5 323 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 AQP12AQ8IXF9 295 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 ZNF561Q8N587 486 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 CCDC197Q8NCU1 140 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 TRMT10AQ8TBZ6 339 aaKnown RBP16.63■□□□□ 0.25
COL6A1-203ENST00000466285 WIPF2Q8TF74 440 aaPredicted RBP16.63■□□□□ 0.25
COL6A1-203ENST00000466285 CNN2Q99439 309 aaKnown RBP16.63■□□□□ 0.25
COL6A1-203ENST00000466285 MMP28Q9H239 520 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 ADGRL4Q9HBW9 690 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 RASL12Q9NYN1 266 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 USE1Q9NZ43 259 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 MRM2Q9UI43 246 aaKnown RBP16.63■□□□□ 0.25
COL6A1-203ENST00000466285 IGKV1-27A0A075B6S5 117 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 ACOD1A6NK06 481 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 LOC110117498-PIK3R3F6TDL0 507 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 SLC1A7O00341 560 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 NOS1APO75052 506 aaPredicted RBP16.62■□□□□ 0.25
COL6A1-203ENST00000466285 NXPH2O95156 264 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 RIDAP52758 137 aaKnown RBP16.62■□□□□ 0.25
COL6A1-203ENST00000466285 CRISP1P54107 249 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 ZNF829Q3KNS6 432 aaPredicted RBP16.62■□□□□ 0.25
COL6A1-203ENST00000466285 ZBTB37Q5TC79 503 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 FAHD1Q6P587 224 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 ZNF322Q6U7Q0 402 aaPredicted RBP16.62■□□□□ 0.25
COL6A1-203ENST00000466285 SPATA24Q86W54 205 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 ZNF556Q9HAH1 456 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 TCF19Q9Y242 345 aa16.62■□□□□ 0.25
COL6A1-203ENST00000466285 C17orf98A8MV24 154 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 GSC2O15499 205 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 ZNF737O75373 536 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 INMTO95050 263 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 ANXA8P13928 327 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 ATP6V1B1P15313 513 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 MPZP25189 248 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 ESRRGP62508 458 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 COL10A1Q03692 680 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 PTGES3Q15185 160 aaKnown RBP16.61■□□□□ 0.25
COL6A1-203ENST00000466285 AANATQ16613 207 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 ODF4Q2M2E3 257 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 CLVS2Q5SYC1 327 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 BCL2L15Q5TBC7 163 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 SLC35F2Q8IXU6 374 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 ELMOD2Q8IZ81 293 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 OR5M11Q96RB7 305 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 CDCA4Q9BXL8 241 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 NPFFR1Q9GZQ6 430 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 FAM234AQ9H0X4 552 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 PAPOLBQ9NRJ5 636 aaKnown RBP16.61■□□□□ 0.25
COL6A1-203ENST00000466285 OR52A1Q9UKL2 312 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 R4GMQ9 66 aa16.61■□□□□ 0.25
COL6A1-203ENST00000466285 TCRBV3S1A0A5B6 114 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 A6NDX4 124 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 ZNF254O75437 659 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 APOL3O95236 402 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 ARG1P05089 322 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 FLOT2Q14254 428 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 LCN1P1Q5VSP4 162 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 AADACL4Q5VUY2 407 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 ZNF573Q86YE8 665 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 Q8N2B8 174 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 TPRX1Q8N7U7 411 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 ASCC1Q8N9N2 400 aaKnown RBP16.6■□□□□ 0.25
COL6A1-203ENST00000466285 TBX5Q99593 518 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 CITED2Q99967 270 aaPredicted RBP16.6■□□□□ 0.25
COL6A1-203ENST00000466285 CADM1Q9BY67 442 aaKnown RBP16.6■□□□□ 0.25
COL6A1-203ENST00000466285 C1orf21Q9H246 121 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 HEXA-AS1Q9H8Q6 139 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 MTCH1Q9NZJ7 389 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 DNAJB9Q9UBS3 223 aa16.6■□□□□ 0.25
COL6A1-203ENST00000466285 TMEM82A0PJX8 343 aa16.59■□□□□ 0.25
COL6A1-203ENST00000466285 VGLL3A8MV65 326 aa16.59■□□□□ 0.25
COL6A1-203ENST00000466285 RPP14O95059 124 aaKnown RBP16.59■□□□□ 0.25
COL6A1-203ENST00000466285 SSX2Q16385 188 aa16.59■□□□□ 0.25
COL6A1-203ENST00000466285 BAIAP2L2Q6UXY1 529 aa16.59■□□□□ 0.25
COL6A1-203ENST00000466285 Q6ZSR3 168 aa16.59■□□□□ 0.25
COL6A1-203ENST00000466285 ASB17Q8WXJ9 295 aa16.59■□□□□ 0.25
COL6A1-203ENST00000466285 SLAMF9Q96A28 289 aa16.59■□□□□ 0.25
COL6A1-203ENST00000466285 K7N7A8 449 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 DLGAP1O14490 977 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 FBXO24O75426 580 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 CCL1P22362 96 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 EFNB1P98172 346 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 UBE2V2Q15819 145 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 ZNF626Q68DY1 528 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 MEPCEQ7L2J0 689 aaKnown RBP16.58■□□□□ 0.24
COL6A1-203ENST00000466285 TCEANCQ8N8B7 351 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 UTP4Q969X6 686 aaKnown RBP16.58■□□□□ 0.24
COL6A1-203ENST00000466285 POLDIP2Q9Y2S7 368 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 DNAH9Q9NYC9 4486 aa16.58■□□□□ 0.24
COL6A1-203ENST00000466285 KMT2CQ8NEZ4 4911 aaKnown RBP16.58■□□□□ 0.24
COL6A1-203ENST00000466285 FAM230AA0A1W2PPH8 454 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 MMP23AO75900 390 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 IGHA1P01876 353 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 CALCBP10092 127 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 LGALS4P56470 323 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 EDDM3BP56851 147 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 BLCAPP62952 87 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 EDDM3AQ14507 147 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 SLX4IPQ5VYV7 408 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 C12orf73Q69YU5 71 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms