RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 OR4Q3Q8NH05 313 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 OTOSQ8NHW6 89 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 TFAP2CQ92754 450 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 ZNF714Q96N38 554 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 CMC2Q9NRP2 79 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 MAGEL2Q9UJ55 1249 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 SLC22A13Q9Y226 551 aa11.54□□□□□ -0.56
SMC1A-204ENST00000463684 IGHV2-26A0A0B4J1V2 119 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 A0A0U1RQV5 110 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 FAM183AA6NL82 134 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 CCNB2O95067 398 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 SOX14O95416 240 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 NRASP01111 189 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 CD24P25063 80 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 HTR1DP28221 377 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 THBS3P49746 956 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 MEF2CQ06413 473 aaPredicted RBP11.53□□□□□ -0.56
SMC1A-204ENST00000463684 C9orf152Q5JTZ5 239 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 LCN1P1Q5VSP4 162 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 KCTD18Q6PI47 426 aaPredicted RBP11.53□□□□□ -0.56
SMC1A-204ENST00000463684 ETV3LQ6ZN32 361 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 OSR2Q8N2R0 312 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 NSMCE2Q96MF7 247 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 NRIP2Q9BQI9 281 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 SLC25A33Q9BSK2 321 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 CLEC7AQ9BXN2 247 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 OR51V1Q9H2C8 321 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 ARMC1Q9NVT9 282 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 ENPP5Q9UJA9 477 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 PIGLQ9Y2B2 252 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 LYVE1Q9Y5Y7 322 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 SESN1Q9Y6P5 492 aa11.53□□□□□ -0.56
SMC1A-204ENST00000463684 hADV38S2A0JD32 116 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 PSMB11A5LHX3 300 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 ACOD1A6NK06 481 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 H0YHG0 523 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 MYCNOSP40205 109 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 KRT77Q7Z794 578 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 BATF2Q8N1L9 274 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 AQP11Q8NBQ7 271 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 BCAS4Q8TDM0 211 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.57
SMC1A-204ENST00000463684 TMEM133Q9H2Q1 129 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 VNN3Q9NY84 501 aa11.52□□□□□ -0.57
SMC1A-204ENST00000463684 TMEM269A0A1B0GVZ9 245 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 NUDT19A8MXV4 375 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 SELENOFO60613 162 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 OR2F2O95006 317 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 SLC6A1P30531 599 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 GP2P55259 537 aaKnown RBP11.51□□□□□ -0.57
SMC1A-204ENST00000463684 RPL23AP62750 156 aaKnown RBP11.51□□□□□ -0.57
SMC1A-204ENST00000463684 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 ASRGL1Q7L266 308 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 TRPM8Q7Z2W7 1104 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 MUC7Q8TAX7 377 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 OR51E1Q8TCB6 317 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 CMTM5Q96DZ9 223 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 HES4Q9HCC6 221 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 GPR84Q9NQS5 396 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 PAPOLBQ9NRJ5 636 aaKnown RBP11.51□□□□□ -0.57
SMC1A-204ENST00000463684 DPM3Q9P2X0 92 aa11.51□□□□□ -0.57
SMC1A-204ENST00000463684 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.51□□□□□ -0.578e-7■■■□□ 14.6
SMC1A-204ENST00000463684 LSM4Q9Y4Z0 139 aaKnown RBP11.51□□□□□ -0.57
SMC1A-204ENST00000463684 SH2D7A6NKC9 451 aaPredicted RBP11.5□□□□□ -0.57
SMC1A-204ENST00000463684 M0QZK8 103 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 EDDM3AQ14507 147 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 NKAPLQ5M9Q1 402 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 CLVS2Q5SYC1 327 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 C8orf86Q6ZUL3 223 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 ZNF329Q86UD4 541 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 OR8H2Q8N162 312 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 TEX47Q8TBZ9 253 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 ASCL2Q99929 193 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 PBOV1Q9GZY1 135 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 ZFP57Q9NU63 452 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 FAM206AQ9NX38 181 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 LAMP5Q9UJQ1 280 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 LINC00312Q9Y6C7 94 aa11.5□□□□□ -0.57
SMC1A-204ENST00000463684 PQLC2LA1A4F0 135 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 PRR23D1E9PI22 279 aaPredicted RBP11.49□□□□□ -0.57
SMC1A-204ENST00000463684 PSMD9O00233 223 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 ZNF737O75373 536 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 AMY1AP04745 511 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 AMY2AP04746 511 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 PRR23D2P0DMB1 279 aaPredicted RBP11.49□□□□□ -0.57
SMC1A-204ENST00000463684 ERVK11-1P61568 191 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 ESRRGP62508 458 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 PLBD1Q6P4A8 553 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 HDXQ7Z353 690 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 OR2W3Q7Z3T1 314 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 ABHD12Q8N2K0 398 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 OR4P4Q8NGL7 312 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 SNX22Q96L94 193 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 TEAD3Q99594 435 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 DGCR6LQ9BY27 220 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 GPR173Q9NS66 373 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 TAS2R1Q9NYW7 299 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 KLHDC2Q9Y2U9 406 aa11.49□□□□□ -0.57
SMC1A-204ENST00000463684 LEUTXA8MZ59 168 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 H3BN98 237 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms