RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 RPS4Y2Q8TD47 263 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 GTF3AQ92664 365 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 RADILQ96JH8 1075 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 POM121L2Q96KW2 1035 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 PGLYRP3Q96LB9 341 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 NR1H4Q96RI1 486 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 PDCD1LG2Q9BQ51 273 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CDCA4Q9BXL8 241 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CACNG6Q9BXT2 260 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 PRRG3Q9BZD7 231 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 YIPF3Q9GZM5 350 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 NDEL1Q9GZM8 345 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 FGF23Q9GZV9 251 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 PPIL3Q9H2H8 161 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CHODLQ9H9P2 273 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 B3GAT2Q9NPZ5 323 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CBLN4Q9NTU7 201 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 DDX28Q9NUL7 540 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 FAIMQ9NVQ4 179 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 FAM206AQ9NX38 181 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 PLEK2Q9NYT0 353 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 LAMP5Q9UJQ1 280 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 GNG8Q9UK08 70 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 IKZF2Q9UKS7 526 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 POLR1DQ9Y2S0 133 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 PCDHGB1Q9Y5G3 927 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 N6AMT1Q9Y5N5 214 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 KMT2CQ8NEZ4 4911 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 VWFP04275 2813 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 MALRD1Q5VYJ5 2156 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 IGHV4-61A0A0C4DH41 118 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 A0A1B0GTI1 187 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 MAGEA13PA6NCF6 341 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ANKRD61A6NGH8 418 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 A6NIN4 97 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF670-ZNF695F2Z2N8 137 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ATP6V1G2-DDX39BF2Z307 99 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 F5H5K5 113 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 PIN1P1O15428 100 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 SGCEO43556 437 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 IGKV3-15P01624 115 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TTRP02766 147 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 OR2T7P0C7T2 308 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF823P16415 610 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 DCKP27707 260 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ATP6V1E1P36543 226 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 HTR5AP47898 357 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CX3CR1P49238 355 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF121P58317 390 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ZP1P60852 638 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 GALK2Q01415 458 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TMED1Q13445 227 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CDK5R1Q15078 307 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 MED22Q15528 200 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 GSG1Q2KHT4 349 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 SPRNQ5BIV9 151 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 ELFN2Q5R3F8 820 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 GLYATL3Q5SZD4 288 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 SPATA46Q5T0L3 261 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 UBE2UQ5VVX9 321 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 DMKNQ6E0U4 476 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 SSX8Q7RTT4 187 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 SATL1Q86VE3 508 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 OR8B12Q8NGG6 310 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 OR2T27Q8NH04 317 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 OR1F12Q8NHA8 337 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 C2CD4CQ8TF44 421 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TMEM203Q969S6 136 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 C4orf45Q96LM5 186 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 Q96MT0 163 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 DHRS9Q9BPW9 319 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TEX12Q9BXU0 123 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 C1orf198Q9H425 327 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 RNF121Q9H920 327 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 SCN3BQ9NY72 215 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 MYEF2Q9P2K5 600 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 CRNNQ9UBG3 495 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 FZR1Q9UM11 496 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 EXOSC1Q9Y3B2 195 aaKnown RBP3.03□□□□□ -1.92
SCFD1-204ENST00000463622 TPRKBQ9Y3C4 175 aa3.03□□□□□ -1.92
SCFD1-204ENST00000463622 DYSFO75923 2080 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 PRKDCP78527 4128 aaKnown RBP3.02□□□□□ -1.93
SCFD1-204ENST00000463622 IGHV2OR16-5A0A0B4J2B6 119 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 A0A1W2PPK0 400 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 TMEM129A0AVI4 362 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 SMIM30A4D0T7 59 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 C5orf49A4QMS7 147 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 METTL15A6NJ78 407 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 OR6C65A6NJZ3 312 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 OR4C45A6NMZ5 311 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF878C9JN71 531 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 M0R1B8 84 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 P2RY10O00398 339 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 GPX5O75715 221 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 IGLV3-1P01715 115 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 PRSS2P07478 247 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 H2BFMP0C1H6 154 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 HSMCR30P0CW71 290 aa3.02□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF35P13682 527 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms