RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 HSPA13P48723 471 aa14.66□□□□□ -0.06
VPS52-214ENST00000463486 DGUOKQ16854 277 aa14.66□□□□□ -0.06
VPS52-214ENST00000463486 STX19Q8N4C7 294 aa14.66□□□□□ -0.06
VPS52-214ENST00000463486 GHSRQ92847 366 aa14.66□□□□□ -0.06
VPS52-214ENST00000463486 SPSB1Q96BD6 273 aa14.66□□□□□ -0.06
VPS52-214ENST00000463486 COMMD4Q9H0A8 199 aa14.66□□□□□ -0.06
VPS52-214ENST00000463486 ZCCHC4Q9H5U6 513 aa14.66□□□□□ -0.06
VPS52-214ENST00000463486 CHCHD3Q9NX63 227 aaKnown RBP14.66□□□□□ -0.06
VPS52-214ENST00000463486 LSM2Q9Y333 95 aaKnown RBP14.66□□□□□ -0.06
VPS52-214ENST00000463486 MAB21L2Q9Y586 359 aa14.66□□□□□ -0.06
VPS52-214ENST00000463486 PRKACBP22694 351 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 RBP2P50120 134 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 MED21Q13503 144 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 CNN3Q15417 329 aaKnown RBP14.65□□□□□ -0.06
VPS52-214ENST00000463486 TUSC1Q2TAM9 212 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 C11orf91Q3C1V1 193 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 KLF17Q5JT82 389 aaPredicted RBP14.65□□□□□ -0.06
VPS52-214ENST00000463486 C1QL2Q7Z5L3 287 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 CD177Q8N6Q3 437 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 ZFP41Q8N8Y5 198 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 OR13C5Q8NGS8 318 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 OR13C9Q8NGT0 318 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 TMIGD2Q96BF3 282 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 BORCS8Q96FH0 119 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 SDSLQ96GA7 329 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 DNAJB11Q9UBS4 358 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 RAB26Q9ULW5 256 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 POLDIP2Q9Y2S7 368 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 ZNF281Q9Y2X9 895 aa14.65□□□□□ -0.06
VPS52-214ENST00000463486 TRBV5-5A0A0J9YX44 114 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 SIGLEC5O15389 551 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 CRHBPP24387 322 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 ATP1B3P54709 279 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 MTCP1P56278 107 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 WNT4P56705 351 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 BTN2A1Q7KYR7 527 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 SLC36A1Q7Z2H8 476 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 SERPINA12Q8IW75 414 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 BATF2Q8N1L9 274 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 LY6G5BQ8NDX9 201 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 GPR148Q8TDV2 347 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 OPALINQ96PE5 141 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 NUDT16L1Q9BRJ7 211 aaKnown RBP14.64□□□□□ -0.07
VPS52-214ENST00000463486 DHDHQ9UQ10 334 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 AUP1Q9Y679 476 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 DNHD1Q96M86 4753 aa14.64□□□□□ -0.07
VPS52-214ENST00000463486 IGKV1-12A0A0C4DH73 117 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 RFPL4AA6NLU0 287 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 RFPL4AL1F8VTS6 287 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 IGKV1D-12P01611 117 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 CD1AP06126 327 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 PPIAL4GP0DN37 164 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 SOX2P48431 317 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 ACSM1Q08AH1 577 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 PDZK1IP1Q13113 114 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 CD276Q5ZPR3 534 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 SLC25A26Q70HW3 274 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 OR51A2Q8NGJ7 313 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 OR5D14Q8NGL3 314 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 MYDGFQ969H8 173 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 SLAMF9Q96A28 289 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 SPACA5Q96QH8 159 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 OR5M11Q96RB7 305 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 SCN3BQ9NY72 215 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 METRNQ9UJH8 293 aa14.63□□□□□ -0.07
VPS52-214ENST00000463486 SULT1B1O43704 296 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 ECDO95905 644 aaPredicted RBP14.62□□□□□ -0.07
VPS52-214ENST00000463486 PLATP00750 562 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 MMP9P14780 707 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 PRDX2P32119 198 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 SRP14P37108 136 aaKnown RBP14.62□□□□□ -0.07
VPS52-214ENST00000463486 NPBWR2P48146 333 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 ZP1P60852 638 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 IL13RA1P78552 427 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 IKZF1Q13422 519 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 SMIM21Q3B7S5 101 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 LHFPL2Q6ZUX7 228 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 ZNRF1Q8ND25 227 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 TSEN15Q8WW01 171 aaKnown RBP14.62□□□□□ -0.07
VPS52-214ENST00000463486 UPRTQ96BW1 309 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 ORAI1Q96D31 301 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 MED30Q96HR3 178 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 CEP19Q96LK0 163 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 CNBD2Q96M20 576 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 RPUSD1Q9UJJ7 312 aaKnown RBP14.62□□□□□ -0.07
VPS52-214ENST00000463486 ERGIC3Q9Y282 383 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 TPRKBQ9Y3C4 175 aa14.62□□□□□ -0.07
VPS52-214ENST00000463486 TRBV5-7A0A0A0MS05 114 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 MYL12BO14950 172 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 GPR37O15354 613 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 NDUFB3O43676 98 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 ENSAO43768 121 aaKnown RBP14.61□□□□□ -0.07
VPS52-214ENST00000463486 GPX5O75715 221 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 NXPH2O95156 264 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 CEBPDP49716 269 aaPredicted RBP14.61□□□□□ -0.07
VPS52-214ENST00000463486 TAS2R43P59537 309 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 BDH1Q02338 343 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 YIF1BQ5BJH7 314 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 C8orf46Q8TAG6 207 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 ST8SIA4Q92187 359 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms