RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CRIP3Q6Q6R5 217 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 POC1AQ8NBT0 407 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 OR5H2Q8NGV7 314 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ROBO4Q8WZ75 1007 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 TMEM54Q969K7 222 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 C2orf50Q96LR7 162 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 FOXD3Q9UJU5 478 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF407Q9C0G0 2248 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 IGKV1-9A0A0C4DH69 117 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 TLX3O43711 291 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-204ENST00000461897 PET100P0DJ07 73 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 NTF4P34130 210 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 CSNK1A1P48729 337 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 TNFSF10P50591 281 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF133P52736 654 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-204ENST00000461897 LSM6P62312 80 aaKnown RBP10.84□□□□□ -0.67
COL4A6-204ENST00000461897 ECH1Q13011 328 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 ARL6IP1Q15041 203 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 ANKRD55Q3KP44 614 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF766Q5HY98 468 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 NKAPLQ5M9Q1 402 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 SLC16A14Q7RTX9 510 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-204ENST00000461897 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 CCDC54Q8NEL0 328 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 OR4A4PQ8NGN8 299 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 OR13G1Q8NGZ3 307 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 EMG1Q92979 244 aaKnown RBP10.84□□□□□ -0.67
COL4A6-204ENST00000461897 CPNE4Q96A23 557 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF775Q96BV0 537 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-204ENST00000461897 NARS2Q96I59 477 aaKnown RBP10.84□□□□□ -0.67
COL4A6-204ENST00000461897 ARHGAP5-AS1Q96IT6 56 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 SMIM8Q96KF7 97 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 SOX7Q9BT81 388 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 TM2D1Q9BX74 207 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 SEC11CQ9BY50 192 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 SLC5A7Q9GZV3 580 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 OR10A2Q9H208 303 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 SEC61A2Q9H9S3 476 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 LPAR3Q9UBY5 353 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 POLR1DQ9Y2S0 133 aa10.84□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF891A8MT65 544 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-204ENST00000461897 GPR31O00270 319 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 TAAR5O14804 337 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 CSTBP04080 98 aaKnown RBP10.83□□□□□ -0.68
COL4A6-204ENST00000461897 ZNF708P17019 499 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 THBS4P35443 961 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 NPY4RP50391 375 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 EIF5AP63241 154 aaKnown RBP10.83□□□□□ -0.68
COL4A6-204ENST00000461897 NHLH1Q02575 133 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 PJVKQ0ZLH3 352 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 C10orf128Q5T292 105 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 RTL6Q6ICC9 239 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 IGFL2Q6UWQ7 119 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 LINC00518Q8N0U6 118 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 ASH2LQ9UBL3 628 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 ZNF175Q9Y473 711 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 LIPGQ9Y5X9 500 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 BOD1L1Q8NFC6 3051 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 DNAJC13O75165 2243 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 A0A0U1RQV5 110 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 MSGN1A6NI15 193 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 SERPINE3A8MV23 424 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 RRP8O43159 456 aaKnown RBP10.83□□□□□ -0.68
COL4A6-204ENST00000461897 CYTIPO60759 359 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 HEXAP06865 529 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 NR2C1P13056 603 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 AMY2BP19961 511 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 ECI1P42126 302 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 GUCA2BQ16661 112 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 DEFB109BQ30KR1 87 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 RNFT1Q5M7Z0 435 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 TMEM178AQ8NBL3 297 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 ABHD3Q8WU67 409 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 C10orf35Q96D05 121 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 CNTNAP3BQ96NU0 1288 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 SPACA5Q96QH8 159 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 BANF2Q9H503 90 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 V9GYS6 101 aa10.83□□□□□ -0.68
COL4A6-204ENST00000461897 A0A1W2PP11 408 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 RER1O15258 196 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 ADAP1O75689 374 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 CRTAPO75718 401 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-204ENST00000461897 HCKP08631 526 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 ANOS1P23352 680 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 PTGFRP43088 359 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 ARHGDIBP52566 201 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 SRYQ05066 204 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 C20orf196Q8IYI0 205 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 PNLDC1Q8NA58 520 aaKnown RBP10.82□□□□□ -0.68
COL4A6-204ENST00000461897 TMED6Q8WW62 240 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 FAM71F1Q96KD3 344 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-204ENST00000461897 DECR2Q9NUI1 292 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 OR5AC2Q9NZP5 309 aa10.82□□□□□ -0.68
COL4A6-204ENST00000461897 NCOA6Q14686 2063 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-204ENST00000461897 H7C2Y5 167 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 KCNAB3O43448 404 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 SNAPINO95295 136 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 SLC2A1P11166 492 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 324.6 ms