RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 IGKV6-21A0A0C4DH24 114 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 TMEM72A0PK05 275 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 ERICH2A1L162 156 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 LRCOL1A6NCL2 159 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 CEACAM18A8MTB9 384 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 HSBP1L1C9JCN9 74 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 M0QX08 132 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 OR2A4O95047 310 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 RLN2P04090 185 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 OR4Q2P0C623 313 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 CD28P10747 220 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 MPIP34949 423 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 SPAM1P38567 509 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 P2RY2P41231 377 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 ACOT2P49753 483 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 XKP51811 444 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 CCL23P55773 120 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 ATP5G2Q06055 141 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 FUT5Q11128 374 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 STX3Q13277 289 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 GUSBP1Q15486 140 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 KRTAP13-3Q3SY46 172 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 ATP6AP1LQ52LC2 224 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 ACTL10Q5JWF8 245 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 FAM222AQ5U5X8 452 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 MED27Q6P2C8 311 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 PRSS54Q6PEW0 395 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 SLC25A34Q6PIV7 304 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 CYP4Z1Q86W10 505 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 ITPRIPQ8IWB1 547 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 RNF182Q8N6D2 247 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 ZNF615Q8N8J6 731 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 CLHC1Q8NHS4 586 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 ZNF420Q8TAQ5 688 aaPredicted RBP1.88□□□□□ -2.11
VCL-203ENST00000461383 QKIQ96PU8 341 aaKnown RBP eCLIP1.88□□□□□ -2.11
VCL-203ENST00000461383 OR2A7Q96R45 310 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 ABCB9Q9NP78 766 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 C12orf4Q9NQ89 552 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 NXT1Q9UKK6 140 aaKnown RBP1.88□□□□□ -2.11
VCL-203ENST00000461383 INSIG2Q9Y5U4 225 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 SIGLEC1Q9BZZ2 1709 aa1.88□□□□□ -2.11
VCL-203ENST00000461383 KIAA1671Q9BY89 1806 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 LINC00854A0A1B0GVQ3 168 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 C9JQL5 133 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 PRAMEF26H0Y7S4 382 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 RGS5O15539 181 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 OR7C2O60412 319 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 CDRT1O95170 752 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 LDOC1O95751 146 aaPredicted RBP1.87□□□□□ -2.11
VCL-203ENST00000461383 CST4P01036 141 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 NPPAP01160 153 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 SNRPAP09012 282 aaKnown RBP1.87□□□□□ -2.11
VCL-203ENST00000461383 NELFEP18615 380 aaKnown RBP1.87□□□□□ -2.11
VCL-203ENST00000461383 IL12BP29460 328 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 RPA3P35244 121 aaPredicted RBP1.87□□□□□ -2.11
VCL-203ENST00000461383 MPV17P39210 176 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 PMELP40967 661 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 HTR2BP41595 481 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 TUFMP49411 452 aaKnown RBP1.87□□□□□ -2.11
VCL-203ENST00000461383 NUDT2P50583 147 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 ZNF616Q08AN1 781 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 TRIP13Q15645 432 aaPredicted RBP1.87□□□□□ -2.11
VCL-203ENST00000461383 PSG3Q16557 428 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 FBXL19-AS1Q494R0 122 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 TTMPQ5BVD1 217 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 HBMQ6B0K9 141 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 FAM231DQ6ZW35 169 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 TRMT10CQ7L0Y3 403 aaKnown RBP1.87□□□□□ -2.11
VCL-203ENST00000461383 HMGN2P46Q86SG4 172 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 LRRC6Q86X45 466 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 CYP4Z2PQ8N1L4 340 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 STK40Q8N2I9 435 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 OR2M7Q8NG81 312 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 OR4K2Q8NGD2 314 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 NELFBQ8WX92 580 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 NUP205Q92621 2012 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 WDR34Q96EX3 536 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 ATP6V1G3Q96LB4 118 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 ZNF396Q96N95 335 aaPredicted RBP1.87□□□□□ -2.11
VCL-203ENST00000461383 IP6K3Q96PC2 410 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 CYTH2Q99418 400 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 APOL4Q9BPW4 351 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 SHCBP1LQ9BZQ2 653 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 PLEKHF2Q9H8W4 249 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 PLEKHA1Q9HB21 404 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 DIABLOQ9NR28 239 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 STX18Q9P2W9 335 aaKnown RBP1.87□□□□□ -2.11
VCL-203ENST00000461383 RWDD2AQ9UIY3 292 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 S4R3C0 116 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 GPR179Q6PRD1 2367 aa1.87□□□□□ -2.11
VCL-203ENST00000461383 A0A1W2PQ67 120 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 RPL36A-HNRNPH2H7BZ11 118 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 LGALS9O00182 355 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 UPK2O00526 184 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 CXorf1O96002 111 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 SEC11BP0C7V7 166 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 TAC1P20366 129 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 KCNJ3P48549 501 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 RAB38P57729 211 aa1.86□□□□□ -2.11
VCL-203ENST00000461383 RAB25P57735 213 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms