RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PIPP12273 146 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-202ENST00000461127 KRTAP10-11P60412 298 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 ATPAF1Q5TC12 328 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-202ENST00000461127 LINC01590Q5TEZ4 76 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 DPY19L4Q7Z388 723 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 ERI1Q8IV48 349 aaKnown RBP13.95□□□□□ -0.18
TOP3A-202ENST00000461127 OR2AE1Q8NHA4 323 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 WIPF2Q8TF74 440 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-202ENST00000461127 DPF1Q92782 380 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 MED30Q96HR3 178 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 PRSS22Q9GZN4 317 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 CCDC90BQ9GZT6 254 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 DNTTIP1Q9H147 329 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 OPA3Q9H6K4 179 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 HAO2Q9NYQ3 351 aa13.95□□□□□ -0.18
TOP3A-202ENST00000461127 SLC25A10Q9UBX3 287 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-202ENST00000461127 ANKRD30BLA7E2S9 258 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 ZNF823P16415 610 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 NDUFB7P17568 137 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 SLC15A1P46059 708 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 ST3GAL4Q11206 333 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 SNAI3Q3KNW1 292 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 WDR82Q6UXN9 313 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 SHFQ7M4L6 423 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 ZNF511Q8NB15 262 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 SLC26A10Q8NG04 563 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 OR56B2PQ8NGI1 322 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 OR52I1Q8NGK6 324 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 TMEM80Q96HE8 168 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 OR5M11Q96RB7 305 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 INTS14Q96SY0 518 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 CDCA4Q9BXL8 241 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 GPR61Q9BZJ8 451 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 DUSP21Q9H596 190 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 ADGRL4Q9HBW9 690 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 MRPS18AQ9NVS2 196 aaKnown RBP13.94□□□□□ -0.18
TOP3A-202ENST00000461127 EXOGQ9Y2C4 368 aaKnown RBP13.94□□□□□ -0.18
TOP3A-202ENST00000461127 SNX5Q9Y5X3 404 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 U3KQK5 164 aa13.94□□□□□ -0.18
TOP3A-202ENST00000461127 SELENOFO60613 162 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 ALDOBP05062 364 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 CDK1P06493 297 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 NHLRC4P0CG21 123 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-202ENST00000461127 MYL12AP19105 171 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 PAX6P26367 422 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 DDOSTP39656 456 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 LGALS4P56470 323 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 ACTC1P68032 377 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 ACTA1P68133 377 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 CNN3Q15417 329 aaKnown RBP13.93□□□□□ -0.18
TOP3A-202ENST00000461127 GLYATL3Q5SZD4 288 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 STUMQ69YW2 141 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 LYPD4Q6UWN0 246 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 SLC16A9Q7RTY1 509 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 C11orf53Q8IXP5 236 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 SLC35F2Q8IXU6 374 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 TSPAN14Q8NG11 270 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 OR1M1Q8NGA1 313 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 OR10H4Q8NGA5 316 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 OR5T2Q8NGG2 359 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 OR6N2Q8NGY6 317 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 SEH1LQ96EE3 360 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 AJUBAQ96IF1 538 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 WNT10AQ9GZT5 417 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 FKBP14Q9NWM8 211 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 PAK1IP1Q9NWT1 392 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-202ENST00000461127 CHCHD3Q9NX63 227 aaKnown RBP13.93□□□□□ -0.18
TOP3A-202ENST00000461127 CYB5R1Q9UHQ9 305 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 ZNF391Q9UJN7 358 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 COMMD3-BMI1R4GMX3 469 aa13.93□□□□□ -0.18
TOP3A-202ENST00000461127 A0A087WXM4 84 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 TRBV23-1A0A0A0MS06 115 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.92□□□□□ -0.18
TOP3A-202ENST00000461127 MRPS14O60783 128 aaKnown RBP13.92□□□□□ -0.18
TOP3A-202ENST00000461127 SPARCP09486 303 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 SELLP14151 372 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 DCKP27707 260 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 ENTPD1P49961 510 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 CAV3P56539 151 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 EGFEM1PQ0D2K5 195 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 DOC2BQ14184 412 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 HCP5Q6MZN7 132 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 PIFOQ8TCI5 191 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 YIPF3Q9GZM5 350 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 HEXA-AS1Q9H8Q6 139 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 FGF20Q9NP95 211 aaPredicted RBP13.92□□□□□ -0.18
TOP3A-202ENST00000461127 PNRC2Q9NPJ4 139 aaKnown RBP13.92□□□□□ -0.18
TOP3A-202ENST00000461127 MRPL22Q9NWU5 206 aaKnown RBP13.92□□□□□ -0.18
TOP3A-202ENST00000461127 KCNG2Q9UJ96 466 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 PITPNC1Q9UKF7 332 aa13.92□□□□□ -0.18
TOP3A-202ENST00000461127 DIMT1Q9UNQ2 313 aaKnown RBP13.92□□□□□ -0.18
TOP3A-202ENST00000461127 DAPL1A0PJW8 107 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 ZNF670-ZNF695F2Z2N8 137 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 ZNF593O00488 134 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-202ENST00000461127 MT-ND2P03891 347 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 AMY2BP19961 511 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 VDAC2P45880 294 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-202ENST00000461127 CD83Q01151 205 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 ZNF773Q6PK81 442 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 DRAM2Q6UX65 266 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms