RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 SP6Q3SY56 376 aa13.58□□□□□ -0.23
SSR4-206ENST00000460616 ABHD12BQ7Z5M8 362 aaPredicted RBP13.58□□□□□ -0.23
SSR4-206ENST00000460616 METTL27Q8N6F8 245 aaPredicted RBP13.58□□□□□ -0.23
SSR4-206ENST00000460616 ABHD5Q8WTS1 349 aa13.58□□□□□ -0.23
SSR4-206ENST00000460616 C11orf40Q8WZ69 217 aa13.58□□□□□ -0.23
SSR4-206ENST00000460616 PACRGQ96M98 296 aaPredicted RBP13.58□□□□□ -0.23
SSR4-206ENST00000460616 NEU1Q99519 415 aa13.58□□□□□ -0.23
SSR4-206ENST00000460616 SOX7Q9BT81 388 aa13.58□□□□□ -0.23
SSR4-206ENST00000460616 SUCNR1Q9BXA5 334 aa13.58□□□□□ -0.23
SSR4-206ENST00000460616 PNO1Q9NRX1 252 aaKnown RBP13.58□□□□□ -0.23
SSR4-206ENST00000460616 PADI1Q9ULC6 663 aa13.58□□□□□ -0.23
SSR4-206ENST00000460616 NPIPA1Q9UND3 350 aa13.58□□□□□ -0.23
SSR4-206ENST00000460616 RCL1Q9Y2P8 373 aaKnown RBP13.58□□□□□ -0.23
SSR4-206ENST00000460616 TCAPO15273 167 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 IGLV3-19P01714 112 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 SRP19P09132 144 aaKnown RBP13.58□□□□□ -0.24
SSR4-206ENST00000460616 IL11P20809 199 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 IL2RGP31785 369 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 GLIPR1P48060 266 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 USF2Q15853 346 aaPredicted RBP13.58□□□□□ -0.24
SSR4-206ENST00000460616 SLC22A25Q6T423 547 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 TGIF2LXQ8IUE1 241 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 WDFY1Q8IWB7 410 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 AVL9Q8NBF6 648 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 GPBAR1Q8TDU6 330 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 PTPMT1Q8WUK0 201 aaPredicted RBP13.58□□□□□ -0.24
SSR4-206ENST00000460616 ASB10Q8WXI3 467 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 FRZBQ92765 325 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 TVP23CQ96ET8 276 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 MMABQ96EY8 250 aaPredicted RBP13.58□□□□□ -0.24
SSR4-206ENST00000460616 PECRQ9BY49 303 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 OR8D2Q9GZM6 311 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 THADAQ6YHU6 1953 aa13.58□□□□□ -0.24
SSR4-206ENST00000460616 IGKV1D-8A0A087WSZ0 117 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 NSG1A0A0A6YYJ2 146 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 SMCO3A2RU48 225 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 CDC14CA4D256 554 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 MS4A18H0YCH9 400 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 HPNP05981 417 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 IGHV4-34P06331 123 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 OR5H8P0DN80 308 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 PAX1P15863 534 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 IL12BP29460 328 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 RAB4BP61018 213 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 PRTGQ2VWP7 1150 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 MS4A18Q3C1V0 323 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 OR10S1Q8NGN2 331 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 OR5R1Q8NH85 324 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 SLC46A1Q96NT5 459 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 GAL3ST4Q96RP7 486 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 KCNK17Q96T54 332 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 NIPSNAP3BQ9BS92 247 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 TBL1XR1Q9BZK7 514 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 FAM86C1Q9NVL1 165 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 LAMA1P25391 3075 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 KNL1Q8NG31 2342 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 ASCL1P50553 236 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 MAML2Q8IZL2 1156 aaPredicted RBP13.57□□□□□ -0.24
SSR4-206ENST00000460616 OR2G3Q8NGZ4 309 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 STT3BQ8TCJ2 826 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 FAM71F1Q96KD3 344 aaPredicted RBP13.57□□□□□ -0.24
SSR4-206ENST00000460616 TP53TG5Q9Y2B4 290 aa13.57□□□□□ -0.24
SSR4-206ENST00000460616 FAM221BA6H8Z2 402 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 FRG2CA6NGY1 282 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 DHRS7CA6NNS2 312 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 MKRN2OSH3BPM6 223 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 GIMD1P0DJR0 217 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 PIGPP57054 158 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 DMRTC1Q5HYR2 192 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 ZNF385CQ66K41 422 aaPredicted RBP13.56□□□□□ -0.24
SSR4-206ENST00000460616 SPSB3Q6PJ21 355 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 DPPA2Q7Z7J5 298 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 ZFP62Q8NB50 900 aaPredicted RBP13.56□□□□□ -0.24
SSR4-206ENST00000460616 OR5D18Q8NGL1 313 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 ADAMTS18Q8TE60 1221 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 BMFQ96LC9 184 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 ABHD14AQ9BUJ0 271 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 CRLF2Q9HC73 371 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 MED29Q9NX70 200 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 LIPGQ9Y5X9 500 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 RFNGQ9Y644 331 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 SERPINE3A8MV23 424 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 CDRT15L2A8MXV6 281 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 C10orf142B7Z368 130 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 FTCDNL1E5RQL4 147 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 PHOX2AO14813 284 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 DAP3P51398 398 aaKnown RBP13.56□□□□□ -0.24
SSR4-206ENST00000460616 IL13RA2Q14627 380 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 TMEM176BQ3YBM2 270 aaPredicted RBP13.56□□□□□ -0.24
SSR4-206ENST00000460616 C4orf17Q53FE4 359 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 ARMC6Q6NXE6 501 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 CYB561D1Q8N8Q1 229 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 GPR119Q8TDV5 335 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 FAM210BQ96KR6 192 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 RBM14Q96PK6 669 aaKnown RBP13.56□□□□□ -0.24
SSR4-206ENST00000460616 HIST1H2BLQ99880 126 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 SLC25A31Q9H0C2 315 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 ZNF700Q9H0M5 742 aa13.56□□□□□ -0.24
SSR4-206ENST00000460616 GPR84Q9NQS5 396 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms