RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 PHF21AQ96BD5 680 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 MED30Q96HR3 178 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 NRIP2Q9BQI9 281 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 URM1Q9BTM9 101 aaKnown RBP9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 SPACA1Q9HBV2 294 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 IL36GQ9NZH8 169 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 ING4Q9UNL4 249 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 IFITM5A6NNB3 132 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 AIPO00170 330 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 RP2O75695 350 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 CDRT1O95170 752 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 PLATP00750 562 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 KNG1P01042 644 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 LHBP01229 141 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 COL8A2P25067 703 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 CFPP27918 469 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 SDC2P34741 201 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 NPY4RP50391 375 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 RORCP51449 518 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 DYNC1I2Q13409 638 aaKnown RBP9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 INSL4Q14641 139 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 TUSC1Q2TAM9 212 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 C1orf100Q5SVJ3 147 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 FAM27D1Q5T7N8 215 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 ELP2Q6IA86 826 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 DCDC5Q6ZRR9 648 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 LRRTM1Q86UE6 522 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 FAM58AQ8N1B3 248 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 ZNF525Q8N782 197 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 BOLLQ8N9W6 283 aaKnown RBP9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 C10orf105Q8TEF2 133 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 ACOT12Q8WYK0 555 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 EMG1Q92979 244 aaKnown RBP9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 GAL3ST1Q99999 423 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 CENPOQ9BU64 300 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 CNTD2Q9H8S5 307 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 SEBOXQ9HB31 216 aaPredicted RBP9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 ABRACLQ9P1F3 81 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 NLKQ9UBE8 527 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 MIOXQ9UGB7 285 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 STEAP1Q9UHE8 339 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 AK6Q9Y3D8 172 aaKnown RBP9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 DOPEY2Q9Y3R5 2298 aa9.28□□□□□ -0.92
SMNDC1-203ENST00000460483 IGHV3-64DA0A0J9YX35 117 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 FUOMA2VDF0 154 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 METTL21EPA6NDL7 271 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 SH2D1BO14796 132 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 AKR7A2O43488 359 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 CYB5R3P00387 301 aaPredicted RBP9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 CALCBP10092 127 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 CD37P11049 281 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 NR4A2P43354 598 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 SERPINB10P48595 397 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 ZP1P60852 638 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 FGF12P61328 243 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 ARL6IP1Q15041 203 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 DGUOKQ16854 277 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 TEX36Q5VZQ5 186 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 MZT2AQ6P582 158 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 GLIPR1L1Q6UWM5 242 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 ASCL4Q6XD76 172 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 OR2W3Q7Z3T1 314 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 WDR86Q86TI4 376 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 LRRC28Q86X40 367 aaPredicted RBP9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 CALHM1Q8IU99 346 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 C11orf53Q8IXP5 236 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 OSR2Q8N2R0 312 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 GCSAMQ8N6F7 178 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 CHST4Q8NCG5 386 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 OR5D18Q8NGL1 313 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 SLAMF9Q96A28 289 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 PTX4Q96A99 478 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 RFT1Q96AA3 541 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 DGCR14Q96DF8 476 aaKnown RBP9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 SPACA5Q96QH8 159 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 RSL24D1Q9UHA3 163 aaKnown RBP9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 WIPI2Q9Y4P8 454 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 ETV7Q9Y603 341 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 PKDREJQ9NTG1 2253 aa9.27□□□□□ -0.93
SMNDC1-203ENST00000460483 IGKV1-27A0A075B6S5 117 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 LOC100996750A0A140TA64 210 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A10PA6NDY2 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A18PA6NE21 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A16PA6NEW6 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A20PA6NIJ5 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A8PA6NJQ4 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A7PA6NKC0 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 OR2AT4A6NND4 320 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A22PA8MWA6 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A12PA8MX19 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A5PA8MXJ8 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A23PA8MXZ1 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 SPRY1O43609 319 aaPredicted RBP9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 SYNGR1O43759 233 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 NDUFS7O75251 213 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 CRTAPO75718 401 aaPredicted RBP9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 HTR3BO95264 441 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 CHRM2P08172 466 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A15PP0C7V4 464 aa9.26□□□□□ -0.93
SMNDC1-203ENST00000460483 FAM90A13PP0C7W8 464 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms