RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 FNDC4Q9H6D8 234 aaPredicted RBP4.64□□□□□ -1.67
VPS41-209ENST00000457055 B3GAT2Q9NPZ5 323 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 SLC52A3Q9NQ40 469 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 SPHK2Q9NRA0 654 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DOK5Q9P104 306 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DUX4Q9UBX2 424 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 TCF19Q9Y242 345 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 WSB1Q9Y6I7 421 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 PTPRJQ12913 1337 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 IGSF9BQ9UPX0 1349 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 PKD1L2Q7Z442 2459 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 MYH10P35580 1976 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 TRAV30A0A087WSZ9 112 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 A0A087WUJ7 227 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 BORCS7-ASMTA0A0B4J1R7 106 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 LRIT2A6NDA9 550 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 SERINC4A6NH21 518 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 FAM159BA6NKW6 160 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 YJEFN3A6XGL0 299 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 LINC00473A8K010 186 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 FAM166BA8MTA8 275 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 A8MVM7 634 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 ZNF587BE7ETH6 402 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 GFYI3L273 518 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 TAPBPO15533 448 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 CRXO43186 299 aaPredicted RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 SOX15O60248 233 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 STK16O75716 305 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 ATP5LO75964 103 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 OR7C1O76099 320 aaPredicted RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 STK17BO94768 372 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 TOMM40O96008 361 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 EDN1P05305 212 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 TFAP2AP05549 437 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 CELA2AP08217 269 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 UCHL1P09936 223 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 ALDOCP09972 364 aaKnown RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 SMIM18P0DKX4 95 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 GATA1P15976 413 aaPredicted RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 ABOP16442 354 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 AOC1P19801 751 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 PGCP20142 388 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 GJB2P29033 226 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 ETV6P41212 452 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 AQP5P55064 265 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 RPL31P62899 125 aaKnown RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 CDK5Q00535 292 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 ZNF844Q08AG5 666 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 MYBPHQ13203 477 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 HTR4Q13639 388 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 EIF2B1Q14232 305 aaKnown RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 PMVKQ15126 192 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 RHEBQ15382 184 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 SRSF7Q16629 238 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS41-209ENST00000457055 TP53I3Q53FA7 332 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 DMKNQ6E0U4 476 aaPredicted RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 DUX4L9Q6RFH8 374 aaPredicted RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 AGTRAPQ6RW13 159 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 PQLC2Q6ZP29 291 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 FAM19A5Q7Z5A7 132 aaPredicted RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 ANKRD37Q7Z713 158 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 LYG1Q8N1E2 194 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 IQCF1Q8N6M8 205 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 OR9I1Q8NGQ6 314 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 OR1J2Q8NGS2 313 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 OR13J1Q8NGT2 312 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 OR14A16Q8NHC5 309 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 MCFD2Q8NI22 146 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 SPPL2BQ8TCT7 592 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 FBXL8Q96CD0 374 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 RNF183Q96D59 192 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 ADTRPQ96IZ2 230 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 SLC35G5Q96KT7 338 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 FCRL5Q96RD9 977 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 CLCC1Q96S66 551 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 PPDPFQ9H3Y8 114 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 MAGIXQ9H6Y5 334 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 SFXN1Q9H9B4 322 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 ELOVL5Q9NYP7 299 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 TRAPPC2LQ9UL33 140 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 FZR1Q9UM11 496 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 U3KQ87 197 aa4.63□□□□□ -1.67
VPS41-209ENST00000457055 KMT2BQ9UMN6 2715 aaPredicted RBP4.63□□□□□ -1.67
VPS41-209ENST00000457055 PLXNB2O15031 1838 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 FRMPD3Q5JV73 1810 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 TRAV39A0A0B4J263 110 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 EXOC1LA0A1B0GW35 172 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 A0A1W2PRE2 83 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 OR5H1A6NKK0 313 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 E7EQ34 232 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 F5H6K3 240 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 H3BMH7 237 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 GALR3O60755 368 aaPredicted RBP4.62□□□□□ -1.67
VPS41-209ENST00000457055 RDH16O75452 317 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 SNAPC5O75971 98 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 FABP3P05413 133 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 DBIP07108 87 aaKnown RBP4.62□□□□□ -1.67
VPS41-209ENST00000457055 CTSLP07711 333 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 IL6RP08887 468 aaPredicted RBP4.62□□□□□ -1.67
VPS41-209ENST00000457055 H2BFMP0C1H6 154 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms