RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 OR5H15A6NDH6 313 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 ARGFXA6NJG6 315 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 OR5H1A6NKK0 313 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 VSTM2BA6NLU5 285 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 RPL36A-HNRNPH2H7BZ11 118 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 SLC31A2O15432 143 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 IGHG1P01857 330 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 CD63P08962 238 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 SRP19P09132 144 aaKnown RBP12.01□□□□□ -0.49
PTPRE-204ENST00000455661 FCGR2AP12318 317 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF43P17038 809 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 CDAP32320 146 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 SFTPDP35247 375 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 CAPZBP47756 277 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 RND3P61587 244 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 GRB2P62993 217 aaKnown RBP12.01□□□□□ -0.49
PTPRE-204ENST00000455661 UEVLDQ8IX04 471 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 OR52M1Q8NGK5 317 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 OR1N1Q8NGS0 311 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 PGAM5Q96HS1 289 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 MRPL13Q9BYD1 178 aaKnown RBP12.01□□□□□ -0.49
PTPRE-204ENST00000455661 GPR61Q9BZJ8 451 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 KIAA1456Q9P272 454 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 ZDHHC8Q9ULC8 765 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 C5orf42Q9H799 3197 aa12.01□□□□□ -0.49
PTPRE-204ENST00000455661 FAM230AA0A1W2PPH8 454 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 LIPT2A6NK58 231 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF726A6NNF4 738 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 RER1O15258 196 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 HSPA12AO43301 675 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 CCL20P78556 96 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 EWSR1Q01844 656 aaKnown RBP eCLIP12□□□□□ -0.49
PTPRE-204ENST00000455661 GAMTQ14353 236 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 HAGHQ16775 308 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 OR2T2Q6IF00 324 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 SLC16A14Q7RTX9 510 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 ZFP62Q8NB50 900 aaPredicted RBP12□□□□□ -0.49
PTPRE-204ENST00000455661 NOXO1Q8NFA2 376 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 OR14L1PQ8NHC6 308 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 ZDHHC19Q8WVZ1 309 aaPredicted RBP12□□□□□ -0.49
PTPRE-204ENST00000455661 C18orf12Q96KH6 178 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 SYT3Q9BQG1 590 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 ARID1AO14497 2285 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 A0A087X0M5 115 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 TGIF2-C20orf24A0A0A6YYL0 155 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 A0A1B0GX30 115 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 A0A1W2PNV4 684 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 C2orf72A6NCS6 295 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 H3BML4 177 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 ADAM10O14672 748 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 TRGC2P03986 189 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 SOD3P08294 240 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 SELLP14151 372 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 GLIPR1P48060 266 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 TAS2R60P59551 318 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 ERVFRD-1P60508 538 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 C17orf67Q0P5P2 114 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 KHDC3LQ587J8 217 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 SLC22A25Q6T423 547 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 PARM1Q6UWI2 310 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 LILRB2Q8N423 598 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 HDHD3Q9BSH5 251 aaPredicted RBP12□□□□□ -0.49
PTPRE-204ENST00000455661 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 AK3Q9UIJ7 227 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 VDAC3Q9Y277 283 aa12□□□□□ -0.49
PTPRE-204ENST00000455661 H0YL77 283 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 HSPB1P04792 205 aaKnown RBP11.99□□□□□ -0.49
PTPRE-204ENST00000455661 KLK2P20151 261 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 FXYD4P59646 89 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 LIN37Q96GY3 246 aaPredicted RBP11.99□□□□□ -0.49
PTPRE-204ENST00000455661 REEP6Q96HR9 211 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 RPP25Q9BUL9 199 aaKnown RBP11.99□□□□□ -0.49
PTPRE-204ENST00000455661 NXT1Q9UKK6 140 aaKnown RBP11.99□□□□□ -0.49
PTPRE-204ENST00000455661 TCFL5Q9UL49 500 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 LIPGQ9Y5X9 500 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 SPTY2D1-AS1A0A0U1RR47 76 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF724A8MTY0 619 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 TGOLN2O43493 480 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 FABP4P15090 132 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 ASCL1P50553 236 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 TMEM176BQ3YBM2 270 aaPredicted RBP11.99□□□□□ -0.49
PTPRE-204ENST00000455661 GFI1BQ5VTD9 330 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 SPSB3Q6PJ21 355 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 SLC35E3Q7Z769 313 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 OR2C3Q8N628 320 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 M1APQ8TC57 530 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 HAS2Q92819 552 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 BOD1Q96IK1 185 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 SSX3Q99909 188 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 WSB1Q9Y6I7 421 aa11.99□□□□□ -0.49
PTPRE-204ENST00000455661 IGHV5-51A0A0C4DH38 117 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 CDRT15L2A8MXV6 281 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 B4DEV8 164 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 SCAF4O95104 1147 aaKnown RBP11.98□□□□□ -0.49
PTPRE-204ENST00000455661 SEMA4FO95754 770 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 PGA4P0DJD7 388 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 PGA3P0DJD8 388 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 THEGLP0DJG4 465 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms