RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ODF3BA8MYP8 253 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 TK1P04183 234 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 CCL1P22362 96 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 POLR2IP36954 125 aaKnown RBP12.97□□□□□ -0.33
GPC1-206ENST00000455111 HERPUD1Q15011 391 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 UBE2V2Q15819 145 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 CLVS2Q5SYC1 327 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 Q6ZS46 218 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 ASRGL1Q7L266 308 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 COMMD2Q86X83 199 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 LYG1Q8N1E2 194 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 ZNF561Q8N587 486 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 KLHDC1Q8N7A1 406 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 OR51G2Q8NGK0 314 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 OR5D13Q8NGL4 314 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 OR2T27Q8NH04 317 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 ASB17Q8WXJ9 295 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 CADM1Q9BY67 442 aaKnown RBP12.97□□□□□ -0.33
GPC1-206ENST00000455111 SERTAD4Q9NUC0 356 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 MTCH1Q9NZJ7 389 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 IL36RNQ9UBH0 155 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 TMEM82A0PJX8 343 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 ADARB2-AS1A8MUL3 147 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 LOC110117498-PIK3R3F6TDL0 507 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 DLGAP1O14490 977 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 APOL3O95236 402 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 PIPP12273 146 aaPredicted RBP12.96□□□□□ -0.33
GPC1-206ENST00000455111 CAPZA1P52907 286 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 ZNF829Q3KNS6 432 aaPredicted RBP12.96□□□□□ -0.33
GPC1-206ENST00000455111 FBLN7Q53RD9 439 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 SAMD5Q5TGI4 173 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 LCN1P1Q5VSP4 162 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 NXNL2Q5VZ03 156 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 RNF144BQ7Z419 303 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 TMEM163Q8TC26 289 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 IL4I1Q96RQ9 567 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 OR14J1Q9UGF5 321 aa12.96□□□□□ -0.33
GPC1-206ENST00000455111 K7N7A8 449 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 GYG2O15488 501 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 GSC2O15499 205 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 PRB2P02812 416 aaPredicted RBP12.95□□□□□ -0.34
GPC1-206ENST00000455111 CSF1P09603 554 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 COL10A1Q03692 680 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 BLMHQ13867 455 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 AANATQ16613 207 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 ODF4Q2M2E3 257 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 C2orf68Q2NKX9 166 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 SMIM21Q3B7S5 101 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 PLA1AQ53H76 456 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 KPRPQ5T749 579 aaPredicted RBP12.95□□□□□ -0.34
GPC1-206ENST00000455111 BCL2L15Q5TBC7 163 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 KDM4DQ6B0I6 523 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 CATSPERDQ86XM0 798 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 PRSS35Q8N3Z0 413 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 TRMT10AQ8TBZ6 339 aaKnown RBP12.95□□□□□ -0.34
GPC1-206ENST00000455111 ITFG2Q969R8 447 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 TBX5Q99593 518 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 CLN6Q9NWW5 311 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 FAM53CQ9NYF3 392 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 USE1Q9NZ43 259 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 GTF2A1LQ9UNN4 478 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 TMEM14AQ9Y6G1 99 aa12.95□□□□□ -0.34
GPC1-206ENST00000455111 A6NDX4 124 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 VGLL3A8MV65 326 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 RPP14O95059 124 aaKnown RBP12.94□□□□□ -0.34
GPC1-206ENST00000455111 NXPH2O95156 264 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 ISL1P61371 349 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 ESRRGP62508 458 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 IL24Q13007 206 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 DNAL1Q4LDG9 190 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 ZNF573Q86YE8 665 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 Q8N2B8 174 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 OR52N4Q8NGI2 321 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 DNAJC9Q8WXX5 260 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 PKIBQ9C010 78 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 GABARAPL1Q9H0R8 117 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 RANBP3Q9H6Z4 567 aaPredicted RBP12.94□□□□□ -0.34
GPC1-206ENST00000455111 MOB1AQ9H8S9 216 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 SNX5Q9Y5X3 404 aa12.94□□□□□ -0.34
GPC1-206ENST00000455111 A0A1W2PQL4 384 aaPredicted RBP12.93□□□□□ -0.34
GPC1-206ENST00000455111 SLC1A7O00341 560 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 MMP23AO75900 390 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 DNAJC8O75937 253 aaPredicted RBP12.93□□□□□ -0.34
GPC1-206ENST00000455111 INMTO95050 263 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 OPN1MWP04001 364 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 OPN1MW2P0DN77 364 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 OPN1MW3P0DN78 364 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 CD28P10747 220 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 KIR3DL2P43630 455 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 ATP6AP1Q15904 470 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 ZNF626Q68DY1 528 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 TMEM219Q86XT9 240 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 TPRX1Q8N7U7 411 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 SLAMF9Q96A28 289 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 FAM234AQ9H0X4 552 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 KRT84Q9NSB2 600 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 TCF19Q9Y242 345 aa12.93□□□□□ -0.34
GPC1-206ENST00000455111 IGKV1-9A0A0C4DH69 117 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 FAM230AA0A1W2PPH8 454 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms