RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ANXA8P13928 327 aa8.8□□□□□ -1
USP1-204ENST00000452143 CCL3L1P16619 93 aa8.8□□□□□ -1
USP1-204ENST00000452143 CALB2P22676 271 aa8.8□□□□□ -1
USP1-204ENST00000452143 PAX6P26367 422 aa8.8□□□□□ -1
USP1-204ENST00000452143 CEBPDP49716 269 aaPredicted RBP8.8□□□□□ -1
USP1-204ENST00000452143 DYNLT3P51808 116 aa8.8□□□□□ -1
USP1-204ENST00000452143 CNN3Q15417 329 aaKnown RBP8.8□□□□□ -1
USP1-204ENST00000452143 CLVS2Q5SYC1 327 aa8.8□□□□□ -1
USP1-204ENST00000452143 ZNF626Q68DY1 528 aa8.8□□□□□ -1
USP1-204ENST00000452143 ZNF782Q6ZMW2 699 aaPredicted RBP8.8□□□□□ -1
USP1-204ENST00000452143 LHFPL4Q7Z7J7 247 aa8.8□□□□□ -1
USP1-204ENST00000452143 ADGRG5Q8IZF4 528 aa8.8□□□□□ -1
USP1-204ENST00000452143 OR13D1Q8NGV5 346 aa8.8□□□□□ -1
USP1-204ENST00000452143 OR2T27Q8NH04 317 aa8.8□□□□□ -1
USP1-204ENST00000452143 MRAPQ8TCY5 172 aa8.8□□□□□ -1
USP1-204ENST00000452143 WIPF2Q8TF74 440 aaPredicted RBP8.8□□□□□ -1
USP1-204ENST00000452143 DNAJC9Q8WXX5 260 aa8.8□□□□□ -1
USP1-204ENST00000452143 CCDC124Q96CT7 223 aaKnown RBP8.8□□□□□ -1
USP1-204ENST00000452143 MALSU1Q96EH3 234 aa8.8□□□□□ -1
USP1-204ENST00000452143 ZNF488Q96MN9 340 aa8.8□□□□□ -1
USP1-204ENST00000452143 CNN2Q99439 309 aaKnown RBP8.8□□□□□ -1
USP1-204ENST00000452143 TEAD3Q99594 435 aa8.8□□□□□ -1
USP1-204ENST00000452143 NKX3-1Q99801 234 aaPredicted RBP8.8□□□□□ -1
USP1-204ENST00000452143 NECAP2Q9NVZ3 263 aa8.8□□□□□ -1
USP1-204ENST00000452143 CCDC182A6NF36 153 aa8.79□□□□□ -1
USP1-204ENST00000452143 AQP12BA6NM10 295 aa8.79□□□□□ -1
USP1-204ENST00000452143 PRR32B1ATL7 298 aa8.79□□□□□ -1
USP1-204ENST00000452143 K7N7A8 449 aa8.79□□□□□ -1
USP1-204ENST00000452143 PSMD9O00233 223 aa8.79□□□□□ -1
USP1-204ENST00000452143 PEX14O75381 377 aa8.79□□□□□ -1
USP1-204ENST00000452143 PRB2P02812 416 aaPredicted RBP8.79□□□□□ -1
USP1-204ENST00000452143 ARG1P05089 322 aa8.79□□□□□ -1
USP1-204ENST00000452143 MRPL3P09001 348 aaKnown RBP8.79□□□□□ -1
USP1-204ENST00000452143 HCCSP53701 268 aa8.79□□□□□ -1
USP1-204ENST00000452143 DLX6P56179 175 aa8.79□□□□□ -1
USP1-204ENST00000452143 ERVK11-1P61568 191 aa8.79□□□□□ -1
USP1-204ENST00000452143 MFGE8Q08431 387 aaPredicted RBP8.79□□□□□ -1
USP1-204ENST00000452143 IL24Q13007 206 aa8.79□□□□□ -1
USP1-204ENST00000452143 NSUN5P1Q3KNT7 163 aa8.79□□□□□ -1
USP1-204ENST00000452143 DMRTC1Q5HYR2 192 aa8.79□□□□□ -1
USP1-204ENST00000452143 BCL2L15Q5TBC7 163 aa8.79□□□□□ -1
USP1-204ENST00000452143 HIST2H2BDQ6DRA6 164 aa8.79□□□□□ -1
USP1-204ENST00000452143 TMEM179BQ7Z7N9 219 aa8.79□□□□□ -1
USP1-204ENST00000452143 AQP12AQ8IXF9 295 aa8.79□□□□□ -1
USP1-204ENST00000452143 OR11H6Q8NGC7 330 aa8.79□□□□□ -1
USP1-204ENST00000452143 OR4M1Q8NGD0 313 aa8.79□□□□□ -1
USP1-204ENST00000452143 NSL1Q96IY1 281 aa8.79□□□□□ -1
USP1-204ENST00000452143 MNTQ99583 582 aa8.79□□□□□ -1
USP1-204ENST00000452143 PRRG3Q9BZD7 231 aa8.79□□□□□ -1
USP1-204ENST00000452143 PKIBQ9C010 78 aa8.79□□□□□ -1
USP1-204ENST00000452143 PRSS22Q9GZN4 317 aa8.79□□□□□ -1
USP1-204ENST00000452143 WNT10AQ9GZT5 417 aa8.79□□□□□ -1
USP1-204ENST00000452143 MMP28Q9H239 520 aa8.79□□□□□ -1
USP1-204ENST00000452143 DNAJB9Q9UBS3 223 aa8.79□□□□□ -1
USP1-204ENST00000452143 OR14J1Q9UGF5 321 aa8.79□□□□□ -1
USP1-204ENST00000452143 IKZF2Q9UKS7 526 aa8.79□□□□□ -1
USP1-204ENST00000452143 V9GYS6 101 aa8.79□□□□□ -1
USP1-204ENST00000452143 A6NDX4 124 aa8.78□□□□□ -1
USP1-204ENST00000452143 LOC110117498-PIK3R3F6TDL0 507 aa8.78□□□□□ -1
USP1-204ENST00000452143 ZNF737O75373 536 aa8.78□□□□□ -1
USP1-204ENST00000452143 SRSF10O75494 262 aaKnown RBP8.78□□□□□ -1
USP1-204ENST00000452143 ZNF728P0DKX0 622 aa8.78□□□□□ -1
USP1-204ENST00000452143 IGHV1-8P0DP01 117 aa8.78□□□□□ -1
USP1-204ENST00000452143 CD28P10747 220 aa8.78□□□□□ -1
USP1-204ENST00000452143 PIPP12273 146 aaPredicted RBP8.78□□□□□ -1
USP1-204ENST00000452143 AZGP1P25311 298 aaKnown RBP8.78□□□□□ -1
USP1-204ENST00000452143 LOXL3P58215 753 aa8.78□□□□□ -1
USP1-204ENST00000452143 ACTR3P61158 418 aa8.78□□□□□ -1
USP1-204ENST00000452143 GNGT1P63211 74 aa8.78□□□□□ -1
USP1-204ENST00000452143 HABP2Q14520 560 aaPredicted RBP8.78□□□□□ -1
USP1-204ENST00000452143 SSX2Q16385 188 aa8.78□□□□□ -1
USP1-204ENST00000452143 SNAPC1Q16533 368 aa8.78□□□□□ -1
USP1-204ENST00000452143 OXLD1Q5BKU9 147 aa8.78□□□□□ -1
USP1-204ENST00000452143 ZNF322Q6U7Q0 402 aaPredicted RBP8.78□□□□□ -1
USP1-204ENST00000452143 CCBE1Q6UXH8 406 aaPredicted RBP8.78□□□□□ -1
USP1-204ENST00000452143 Q6ZSR3 168 aa8.78□□□□□ -1
USP1-204ENST00000452143 ASRGL1Q7L266 308 aa8.78□□□□□ -1
USP1-204ENST00000452143 GDPD3Q7L5L3 318 aa8.78□□□□□ -1
USP1-204ENST00000452143 ELMOD2Q8IZ81 293 aa8.78□□□□□ -1
USP1-204ENST00000452143 OR8H2Q8N162 312 aa8.78□□□□□ -1
USP1-204ENST00000452143 ASCC1Q8N9N2 400 aaKnown RBP8.78□□□□□ -1
USP1-204ENST00000452143 CANT1Q8WVQ1 401 aa8.78□□□□□ -1
USP1-204ENST00000452143 SGCDQ92629 289 aa8.78□□□□□ -1
USP1-204ENST00000452143 PHF21AQ96BD5 680 aa8.78□□□□□ -1
USP1-204ENST00000452143 R3HDM4Q96D70 268 aa8.78□□□□□ -1
USP1-204ENST00000452143 GPR173Q9NS66 373 aa8.78□□□□□ -1
USP1-204ENST00000452143 GTF2A1LQ9UNN4 478 aa8.78□□□□□ -1
USP1-204ENST00000452143 COPS3Q9UNS2 423 aa8.78□□□□□ -1
USP1-204ENST00000452143 SLC22A13Q9Y226 551 aa8.78□□□□□ -1
USP1-204ENST00000452143 R4GMQ9 66 aa8.78□□□□□ -1
USP1-204ENST00000452143 KMT2CQ8NEZ4 4911 aaKnown RBP8.78□□□□□ -1
USP1-204ENST00000452143 ADARB2-AS1A8MUL3 147 aa8.77□□□□□ -1.01
USP1-204ENST00000452143 H3BUI4 141 aa8.77□□□□□ -1.01
USP1-204ENST00000452143 F2RL2O00254 374 aa8.77□□□□□ -1.01
USP1-204ENST00000452143 DNAJC8O75937 253 aaPredicted RBP8.77□□□□□ -1.01
USP1-204ENST00000452143 CHRM2P08172 466 aa8.77□□□□□ -1.01
USP1-204ENST00000452143 CCL1P22362 96 aa8.77□□□□□ -1.01
USP1-204ENST00000452143 OR12D2P58182 307 aa8.77□□□□□ -1.01
USP1-204ENST00000452143 CXCR4P61073 352 aa8.77□□□□□ -1.01
USP1-204ENST00000452143 ESRRGP62508 458 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms