RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 C11orf91Q3C1V1 193 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 ZIK1Q3SY52 487 aaPredicted RBP7.11□□□□□ -1.27
RFX3-209ENST00000451859 C17orf107Q6ZR85 190 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 FAM220AQ7Z4H9 259 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 CATSPERDQ86XM0 798 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 ANGPTL5Q86XS5 388 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 ZNF573Q86YE8 665 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 CD177Q8N6Q3 437 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 POC1AQ8NBT0 407 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 OR4M1Q8NGD0 313 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 OR4F5Q8NH21 305 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 C8orf46Q8TAG6 207 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 RORBQ92753 470 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 UBE2FQ969M7 185 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 EME1Q96AY2 570 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 MNTQ99583 582 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 ADI1Q9BV57 179 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 OSBPL10Q9BXB5 764 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 PRDM13Q9H4Q3 707 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 BEX1Q9HBH7 125 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 C19orf12Q9NSK7 152 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 GNG8Q9UK08 70 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 ZNF222Q9UK12 451 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 ORC6Q9Y5N6 252 aa7.11□□□□□ -1.27
RFX3-209ENST00000451859 LOC107986453A0A1B0GWG9 222 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 PQLC2LA1A4F0 135 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 BTBD17A6NE02 478 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 METTL15A6NJ78 407 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 POM121CA8CG34 1229 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 SLC1A7O00341 560 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 FBP1P09467 338 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 OR2T7P0C7T2 308 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 CCL3L1P16619 93 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 COX7A1P24310 79 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 SAA4P35542 130 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 IER3P46695 156 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 SNU13P55769 128 aaKnown RBP7.1□□□□□ -1.27
RFX3-209ENST00000451859 CAV3P56539 151 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 TAF9Q16594 264 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 NCR3LG1Q68D85 454 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 DHRS7BQ6IAN0 325 aaPredicted RBP7.1□□□□□ -1.27
RFX3-209ENST00000451859 CCDC121Q6ZUS5 278 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 LDLRAD3Q86YD5 345 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 CALHM1Q8IU99 346 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 RDH10Q8IZV5 341 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 PRSS35Q8N3Z0 413 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 TMEM86BQ8N661 226 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 ASCC1Q8N9N2 400 aaKnown RBP7.1□□□□□ -1.27
RFX3-209ENST00000451859 OR8J1Q8NGP2 316 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 OR2T27Q8NH04 317 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 C17orf50Q8WW18 174 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 DYRK2Q92630 601 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 RFKQ969G6 155 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 SLAMF9Q96A28 289 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 RNFT2Q96EX2 444 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 RBM4BQ9BQ04 359 aaKnown RBP7.1□□□□□ -1.27
RFX3-209ENST00000451859 DPAGT1Q9H3H5 408 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 ZNRD1Q9P1U0 126 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 AASSQ9UDR5 926 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.1□□□□□ -1.27
RFX3-209ENST00000451859 POLDIP2Q9Y2S7 368 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 CAB39Q9Y376 341 aaPredicted RBP7.1□□□□□ -1.27
RFX3-209ENST00000451859 POMT1Q9Y6A1 747 aa7.1□□□□□ -1.27
RFX3-209ENST00000451859 VWFP04275 2813 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 TRBV23-1A0A0A0MS06 115 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 H3BNX3 289 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 M0R1W7 72 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 DLGAP1O14490 977 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 ENTPD6O75354 484 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 ALPLP05186 524 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 CCL1P22362 96 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 PRDX2P32119 198 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 KIR3DL2P43630 455 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 ERVFRD-1P60508 538 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 RPL31P62899 125 aaKnown RBP7.09□□□□□ -1.27
RFX3-209ENST00000451859 ZNF85Q03923 595 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 EDDM3AQ14507 147 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 LY6EQ16553 131 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 PLA1AQ53H76 456 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 OLFML2AQ68BL7 652 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 TMEM42Q69YG0 159 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 METAP1DQ6UB28 335 aaPredicted RBP7.09□□□□□ -1.27
RFX3-209ENST00000451859 ZNF782Q6ZMW2 699 aaPredicted RBP7.09□□□□□ -1.27
RFX3-209ENST00000451859 MKXQ8IYA7 352 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 SDSLQ96GA7 329 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 METTL8Q9H825 291 aaKnown RBP7.09□□□□□ -1.27
RFX3-209ENST00000451859 RASL12Q9NYN1 266 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 VPREB3Q9UKI3 123 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 SLC7A11Q9UPY5 501 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 RNF114Q9Y508 228 aa7.09□□□□□ -1.27
RFX3-209ENST00000451859 IGKV1-27A0A075B6S5 117 aa7.08□□□□□ -1.28
RFX3-209ENST00000451859 DAPL1A0PJW8 107 aa7.08□□□□□ -1.28
RFX3-209ENST00000451859 CLPSL1A2RUU4 121 aa7.08□□□□□ -1.28
RFX3-209ENST00000451859 DHRS7CA6NNS2 312 aa7.08□□□□□ -1.28
RFX3-209ENST00000451859 F8VVB4 439 aa7.08□□□□□ -1.28
RFX3-209ENST00000451859 F8VWA3 439 aa7.08□□□□□ -1.28
RFX3-209ENST00000451859 H3BUX3 64 aa7.08□□□□□ -1.28
RFX3-209ENST00000451859 GATBO75879 557 aaKnown RBP7.08□□□□□ -1.28
RFX3-209ENST00000451859 SULT1C4O75897 302 aa7.08□□□□□ -1.28
RFX3-209ENST00000451859 NDUFA7O95182 113 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms