RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LINC00869P0C866 280 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 VSIG10L2P0DP72 767 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LIPCP11150 499 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 FUT1P19526 365 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BOP23527 126 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HOXA11P31270 313 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BBP33778 126 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BDP58876 126 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 FXYD4P59646 89 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 UBE2G1P62253 170 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BCP62807 126 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SEMG2Q02383 582 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 GABRA6Q16445 453 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST2H2BEQ16778 126 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ANKRD55Q3KP44 614 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 PAQR6Q6TCH4 344 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ATRAIDQ6UW56 229 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LBX2Q6XYB7 198 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 DGAT2L6Q6ZPD8 337 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LHFPL2Q6ZUX7 228 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 C6orf201Q7Z4U5 140 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TMEM217Q8N7C4 229 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MARCH1Q8TCQ1 289 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BHQ93079 126 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 FAM131CQ96AQ9 280 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TMEM186Q96B77 213 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 FBXO17Q96EF6 278 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BNQ99877 126 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BMQ99879 126 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 RHNO1Q9BSD3 238 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 AGMATQ9BSE5 352 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 C1QTNF6Q9BXI9 259 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LPAR5Q9H1C0 372 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HINT3Q9NQE9 182 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 WRAP73Q9P2S5 460 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 CLCF1Q9UBD9 225 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CLN8Q9UBY8 286 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 VSIG4Q9Y279 399 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 A0A0G2JMM0 328 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 EDDM13A0A1B0GTR0 161 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 A0A1W2PPB8 328 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TMEM8BA6NDV4 472 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CASTOR2A6NHX0 329 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 KIR3DP1A8MWS1 328 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PRAMEF26H0Y7S4 382 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 BCAT2O15382 392 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 DUSP11O75319 330 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 CA11O75493 328 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 STC2O76061 302 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 KBTBD11O94819 623 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H1DP16402 221 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 ALOX5APP20292 161 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 GZMMP51124 257 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SEC13P55735 322 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PPP2CBP62714 309 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PPP2CAP67775 309 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PLGLAQ15195 96 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SHHQ15465 462 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SLC10A6Q3KNW5 377 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PKDCCQ504Y2 493 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 RNFT1Q5M7Z0 435 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TIMM23BQ5SRD1 257 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PRAMEF5Q5TYX0 476 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PRAMEF6Q5VXH4 476 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 FDX2Q6P4F2 183 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ESPNLQ6ZVH7 1005 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CDC20BQ86Y33 519 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 BOD1L2Q8IYS8 172 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SIRT6Q8N6T7 355 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MDGA1Q8NFP4 955 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR2V1Q8NHB1 315 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR10J5Q8NHC4 309 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PLPPR1Q8TBJ4 325 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 UBE2FQ969M7 185 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR1F2PQ96R84 312 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 GPA33Q99795 319 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 BOCQ9BWV1 1114 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CPEB1Q9BZB8 566 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 CST9LQ9H4G1 147 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CXorf36Q9H7Y0 433 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TMEM106BQ9NUM4 274 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MRPL16Q9NX20 251 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 PSENENQ9NZ42 101 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MTCH1Q9NZJ7 389 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SLC45A2Q9UMX9 530 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR2W1Q9Y3N9 320 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HS3ST3A1Q9Y663 406 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ZNF646O15015 1829 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 NUP98P52948 1817 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TRAV9-2A0A087WT02 112 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TRAV34A0A0B4J273 112 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 A0A1B0GW15 77 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 A0A1W2PNV4 684 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ETHE1O95571 254 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SNAI1O95863 264 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 ACTL6AO96019 429 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HLA-DRB1P01911 266 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SNRPCP09234 159 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 CTSSP25774 331 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms