RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 ADIRFQ15847 76 aa6.34□□□□□ -1.39
BEST1-202ENST00000449131 ZNF468Q5VIY5 522 aaPredicted RBP6.34□□□□□ -1.39
BEST1-202ENST00000449131 NAA40Q86UY6 237 aa6.34□□□□□ -1.39
BEST1-202ENST00000449131 CRIPAKQ8N1N5 446 aa6.34□□□□□ -1.39
BEST1-202ENST00000449131 PGLYRP3Q96LB9 341 aa6.34□□□□□ -1.39
BEST1-202ENST00000449131 AMELYQ99218 206 aa6.34□□□□□ -1.39
BEST1-202ENST00000449131 PRRX2Q99811 253 aa6.34□□□□□ -1.39
BEST1-202ENST00000449131 TMEM74BQ9NUR3 256 aa6.34□□□□□ -1.39
BEST1-202ENST00000449131 RNF150Q9ULK6 438 aa6.34□□□□□ -1.39
BEST1-202ENST00000449131 PRELID3BQ9Y3B1 194 aa6.34□□□□□ -1.39
BEST1-202ENST00000449131 ADAM10O14672 748 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 SH2D1BO14796 132 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 DUS4LO95620 317 aaKnown RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 HLA-DQB1P01920 261 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 ASAH2BP0C7U1 165 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 KIR3DL2P43630 455 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 HOXA1P49639 335 aaPredicted RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 LAMTOR1Q6IAA8 161 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 Q7L0L9 218 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 H2BFWTQ7Z2G1 175 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 WDSUB1Q8N9V3 476 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 SLC26A10Q8NG04 563 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 OR5M8Q8NGP6 311 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 OR11L1Q8NGX0 322 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 OR10D3Q8NH80 312 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 TRIB1Q96RU8 372 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 FN3KRPQ9HA64 309 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 RHOFQ9HBH0 211 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 GNG13Q9P2W3 67 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 MEX3AA1L020 520 aaKnown RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 EPOPA6NHQ4 379 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 C17orf112F2Z3M2 114 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 HLA-HP01893 362 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 GABRA1P14867 456 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 HTD2P86397 168 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 OR8B8Q15620 311 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 PABPC1L2AQ5JQF8 200 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 TMEM65Q6PI78 240 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 ADPRHL1Q8NDY3 354 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 OR11G2Q8NGC1 345 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 OR5AP2Q8NGF4 316 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 FBXO17Q96EF6 278 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 GNPNAT1Q96EK6 184 aaPredicted RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 ARV1Q9H2C2 271 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 ZFP64Q9NPA5 681 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 DOCK7Q96N67 2140 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 RAB19A4D1S5 217 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 TRIM77I1YAP6 450 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 ZP3P21754 424 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 CSF2RBP32927 897 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 RAB5CP51148 216 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 GGTLC2Q14390 218 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 OR1C1Q15619 314 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 C4orf17Q53FE4 359 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 TMEM255AQ5JRV8 349 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 WDR74Q6RFH5 385 aaPredicted RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 SSX9Q7RTT3 188 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 DEFB108BQ8NET1 73 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 HGDQ93099 445 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 APOBEC3DQ96AK3 386 aaPredicted RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 MSI2Q96DH6 328 aaKnown RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 IP6K3Q96PC2 410 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 AICDAQ9GZX7 198 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 RAB18Q9NP72 206 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 RCL1Q9Y2P8 373 aaKnown RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 LRP5LA4QPB2 252 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 FIGNL2A6NMB9 653 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 KLF4O43474 513 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 TBX6O95947 436 aaPredicted RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 THY1P04216 161 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 VSIG8P0DPA2 414 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 CCL2P13500 99 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 IL11P20809 199 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 MMP16P51512 607 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 LIMK1P53667 647 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 RPS4XP62701 263 aaKnown RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 TRA2AQ13595 282 aaKnown RBP eCLIP6.33□□□□□ -1.4
BEST1-202ENST00000449131 KIAA0141Q14154 515 aaPredicted RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 FHL5Q5TD97 284 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 MRGPREQ86SM8 312 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 RXFP4Q8TDU9 374 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 RNF133Q8WVZ7 376 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 CTHRC1Q96CG8 243 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 ADAT3Q96EY9 351 aaPredicted RBP6.33□□□□□ -1.4
BEST1-202ENST00000449131 AKR1E2Q96JD6 320 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 FAM173AQ9BQD7 235 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 HIPK2Q9H2X6 1198 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 UCK1Q9HA47 277 aa6.33□□□□□ -1.4
BEST1-202ENST00000449131 SIP14410 1827 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 ANKRD36A6QL64 1941 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 SLC22A20A6NK97 555 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 TOX3O15405 576 aaPredicted RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 PIN1P1O15428 100 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 ZNHIT1O43257 154 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 OR2C1O95371 312 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 VSIG10L2P0DP72 767 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 PNLIPP16233 465 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 MNX1P50219 401 aaPredicted RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 C16orf54Q6UWD8 224 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms