RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GSTT2P0CG29 244 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 GSTT2BP0CG30 244 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 VSIG8P0DPA2 414 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 S100A1P23297 94 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 ZNF787Q6DD87 383 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 HIST2H2BCQ6DN03 193 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 OR2W3Q7Z3T1 314 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 POC1AQ8NBT0 407 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 Q8NFD4 153 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 OR10Z1Q8NGY1 313 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 NEU4Q8WWR8 484 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-203ENST00000449049 KCNK15Q9H427 330 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 ARFGEF3Q5TH69 2177 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 TANC2Q9HCD6 1990 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 TMEM272A0A1B0GTI8 110 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 TMEM14DPA8MWL7 114 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 HPXP02790 462 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 PGA5P0DJD9 388 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 CDKN1AP38936 164 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 ERVK11-1P61568 191 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 GPR176Q14439 515 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 RSU1Q15404 277 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 ZNF181Q2M3W8 571 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 ELP2Q6IA86 826 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 MZT2AQ6P582 158 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 OR5H6Q8NGV6 325 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 CEP19Q96LK0 163 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 CCL19Q99731 98 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 NRIP2Q9BQI9 281 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 MMP27Q9H306 513 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 RHOFQ9HBH0 211 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 PPP1R3CQ9UQK1 317 aa11.86□□□□□ -0.51
SHMT2-203ENST00000449049 TRAPPC2LH3BP13 241 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 SFTPBP07988 381 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 BCL3P20749 454 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 NPBWR2P48146 333 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 UNC119Q13432 240 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 ZNF846Q147U1 533 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 SLC22A6Q4U2R8 563 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 MINDY2Q8NBR6 621 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 OR10K1Q8NGX5 313 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 PTX4Q96A99 478 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 CST11Q9H112 138 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 ELL3Q9HB65 397 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-203ENST00000449049 COMMD3Q9UBI1 195 aa11.85□□□□□ -0.51
SHMT2-203ENST00000449049 hCG_1807616A0A1W2PRN6 198 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 F8VVB4 439 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 F8VWA3 439 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 LHBP01229 141 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 SERPINA2P20848 420 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 CDH24Q86UP0 819 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 Q8IYB0 196 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 TMEM104Q8NE00 496 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 OR11L1Q8NGX0 322 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 KCNG3Q8TAE7 436 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 LRRC29Q8WV35 223 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 ZNF488Q96MN9 340 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 HES4Q9HCC6 221 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 PCDHB16Q9NRJ7 776 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 ICE1Q9Y2F5 2266 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 IGHV1-69-2A0A0G2JMI3 117 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 A0A1W2PP11 408 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 SRRM5B3KS81 715 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 CLDN25C9JDP6 229 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 IFNL4K9M1U5 179 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 CDC14BO60729 498 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 RAB6AP20340 208 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 MRPS11P82912 194 aaKnown RBP11.84□□□□□ -0.51
SHMT2-203ENST00000449049 CD300CQ08708 224 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 PLA2G7Q13093 441 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 OR10K2Q6IF99 312 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 TGIF2LYQ8IUE0 185 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 GCSAMQ8N6F7 178 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 HPS1Q92902 700 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 SLC25A38Q96DW6 304 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 CMTM3Q96MX0 182 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 C6orf62Q9GZU0 229 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-203ENST00000449049 LIME1Q9H400 295 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 RBFOX1Q9NWB1 397 aaKnown RBP11.84□□□□□ -0.51
SHMT2-203ENST00000449049 RNF7Q9UBF6 113 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 RABL2BQ9UNT1 228 aa11.84□□□□□ -0.51
SHMT2-203ENST00000449049 CHD3Q12873 2000 aaKnown RBP11.84□□□□□ -0.51
SHMT2-203ENST00000449049 AKR7A2O43488 359 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 CRTAPO75718 401 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-203ENST00000449049 HTR3BO95264 441 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 CSTBP04080 98 aaKnown RBP11.83□□□□□ -0.52
SHMT2-203ENST00000449049 EFNB2P52799 333 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 KRTAP10-9P60411 292 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 FGF12P61328 243 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 LINC00299Q6ZSB3 139 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 BATF2Q8N1L9 274 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 FAM46BQ96A09 425 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 MRPS24Q96EL2 167 aaKnown RBP11.83□□□□□ -0.52
SHMT2-203ENST00000449049 MIXL1Q9H2W2 232 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 TMEM106BQ9NUM4 274 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 RAB22AQ9UL26 194 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 CACNG2Q9Y698 323 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 LRRK2Q5S007 2527 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 LRRC30A6NM36 301 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 CTDSP2O14595 271 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms