RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 IGHG3P01860 377 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 FUT4P22083 530 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 GIFP27352 417 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 RAE1P78406 368 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 DESI1Q6ICB0 168 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC25A26Q70HW3 274 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC16A9Q7RTY1 509 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 NOXA1Q86UR1 476 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 C1QL4Q86Z23 238 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR51A2Q8NGJ7 313 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 OPALINQ96PE5 141 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 CMSS1Q9BQ75 279 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR2J1Q9GZK6 312 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 COMMD5Q9GZQ3 224 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 GORASP2Q9H8Y8 452 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 MRPL15Q9P015 296 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 ICAM5Q9UMF0 924 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 RPH3ALQ9UNE2 315 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 HMX2A2RU54 273 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF705FA8MVS1 300 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF705DP0CH99 300 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF705BP0CI00 300 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 RTL6Q6ICC9 239 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 NHLRC1Q6VVB1 395 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 HGDQ93099 445 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 RDH12Q96NR8 316 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 BPESC1Q9GZL8 116 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZDHHC11Q9H8X9 412 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 COPZ2Q9P299 210 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 ABCD2Q9UBJ2 740 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 KLK5Q9Y337 293 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 LSM5Q9Y4Y9 91 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 LY6G6DO95868 133 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 MSMBP08118 114 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 TPPP2P59282 170 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 HYAL4Q2M3T9 481 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 LRRC37A5PQ49AS3 106 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 LCN8Q6JVE9 175 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM81Q6P7N7 255 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 RBM45Q8IUH3 476 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 PACRGLQ8N7B6 248 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR52L2PQ8NGH6 319 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 P2RX4Q99571 388 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 GPR84Q9NQS5 396 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 CES1P1Q9UKY3 287 aa4.9□□□□□ -1.63
CDC42BPA-209ENST00000448940 MBD3L4A6NDZ8 208 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 MBD3L3A6NE82 208 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 MBD3L5A6NJ08 208 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM212A6NML5 194 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 J3KTA2 159 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 GNAO1P09471 354 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 RPL7P18124 248 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 G0S2P27469 103 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 BDKRB2P30411 391 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 GABRA4P48169 554 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 DEFA6Q01524 100 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 C11orf91Q3C1V1 193 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 FAM106AQ4KMX7 169 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 PCSK4Q6UW60 755 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 MBD3L2Q8NHZ7 208 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 EDARADDQ8WWZ3 215 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 TFAP2CQ92754 450 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ARL11Q969Q4 196 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 PRDM13Q9H4Q3 707 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SPRR3Q9UBC9 169 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 DYSFO75923 2080 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ASPDHA6ND91 283 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 IMPA2O14732 288 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 GPR37O15354 613 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SCAF4O95104 1147 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ACHEP22303 614 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 CD1BP29016 333 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 RAG2P55895 527 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 NUTF2P61970 127 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 LSM6P62312 80 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 PARP8Q8N3A8 854 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR5M8Q8NGP6 311 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR51E1Q8TCB6 317 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC7A13Q8TCU3 470 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 RNF128Q8TEB7 428 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ABHD14AQ9BUJ0 271 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR6C3Q9NZP0 311 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 MALT1Q9UDY8 824 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZC3H12DA2A288 527 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 GPRIN2O60269 458 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 IGHV3-13P01766 116 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 IGHV3-7P01780 117 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 GLAP06280 429 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 FAM157CP0CG43 387 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 FMODQ06828 376 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SSX9Q7RTT3 188 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 WDSUB1Q8N9V3 476 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR6Q1Q8NGQ2 317 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR4Q3Q8NH05 313 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SMIM12Q96EX1 92 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 TSC2P49815 1807 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 HSBP1O75506 76 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 CGB3P0DN86 165 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 CALCBP10092 127 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 CRYGSP22914 178 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms